Protein Concepts Dictionary

Tableau information

Concept source:  d3lgaa_  amino acid (a.a.) range (ASP6)(ARG251)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEEHHEHEHEEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP6)   (ASP12) E1
	   (LYS16)   (ILE20) E2
	   (ARG25)   (ASP30) E3
	   (GLY32)   (GLU37) E4
	   (GLU37)   (ARG42) H5
	   (GLY45)   (HIS51) E6
	   (HIS54)   (ARG60) E7
	   (ILE63)   (LYS69) H8
	   (PRO79)   (GLY90) H9
	   (ASP95)  (GLY101) E10
	  (GLY105)  (GLY116) H11
	  (GLY119)  (GLU125) E12
	  (GLU128)  (GLY142) H13
	  (ARG146)  (LEU151) E14
	  (ASP164)  (LEU170) E15
	  (VAL177)  (ALA183) H16
	  (GLY188)  (THR194) E17
	  (SER197)  (GLU209) H18
	  (LYS216)  (ASP226) E19
	  (TYR246)  (ARG251) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
E2      159.3°   E2                                                                                                                                   
E3      -24.7°  162.6°   E3                                                                                                                            
E4      155.2°  -33.2°  159.8°   E4                                                                                                                     
H5      106.9°  -88.3°  104.9°  -55.5°   H5                                                                                                              
E6      -68.0°   93.0°  -78.3°  121.8°  160.6°   E6                                                                                                       
E7      140.1°  -60.6°  120.3°  -44.5°  -48.9°  145.7°   E7                                                                                                
H8       74.0°  -95.8°   68.2° -128.5° -162.1°  -36.8° -119.1°   H8                                                                                         
H9     -125.6°   74.3° -111.8°   49.0°  -30.1°  165.2°   19.7°  135.3°   H9                                                                                  
E10      68.3° -100.9°   63.5° -133.8°  163.0°  -34.5° -124.2°   -5.9°  139.4°   E10                                                                          
H11    -113.3°   77.1° -118.6°   44.3°  -19.0°  144.1°   55.9°  172.7°  -41.3° -177.7°   H11                                                                   
E12      79.6°  -92.6°   70.6° -124.1°  154.8°  -44.5° -110.8°   -8.4°  127.0°  -13.5°  165.9°   E12                                                            
H13     -88.0°   92.0° -105.1°   67.3°  -48.8°  111.8°  -91.9°  147.8°  -76.8°  143.6°  -36.1°  156.1°   H13                                                     
E14      91.1°  -84.6°   78.1° -113.5° -142.3°  -57.0°   96.5°  -22.6°  113.2°  -27.8°  151.9°  -14.3° -167.9°   E14                                              
E15      55.1° -111.6°   54.7° -144.7°  159.6°  -29.7° -137.4°  -20.2°  149.7°  -14.4°  166.3°  -27.8°  130.7°  -41.9°   E15                                       
H16    -123.9°   63.8° -132.6°   32.0°  -32.0°  134.6°   55.7°  159.3°  -46.1°  163.3°  -14.4°  156.1°  -38.7°  144.9°  163.8°   H16                                
E17      44.1° -120.2°   48.6° -151.6°  150.9°  -30.1° -148.4°  -32.8°  155.7°  -27.0°  153.8°  -40.3°  118.9°  -54.3°  -12.6°  155.8°   E17                         
H18    -141.9°   58.7° -123.3°   40.8°  -46.6°  146.6°   -4.1°  122.3°  -18.6°  127.5°  -52.4°  114.0°  -88.3°   99.7°  141.0°  -51.8°  152.3°   H18                  
E19     -45.7° -116.3°  -70.1°  119.0°  110.1°  -52.4°  156.8°  -83.7°  140.1°  -78.8°  101.1°  -92.0°   65.0° -106.2°  -65.8°  101.5°  -54.5°  153.1°   E19           
E20    -142.1°   56.6° -130.8°   30.2°  -36.7°  149.5°   19.7°  135.9°  -18.9°  141.5°  -38.0°  128.0°  -73.3°  113.8°  155.7°  -36.1°  167.8°   15.7°  137.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lgaa_ :     (ASP6)  (ARG251)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Pyrococcus abyssi [TaxId: 272844]
 d2pwyb_ :     (GLY5)  (GLY254)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d2pwya_ :     (GLY5)  (ARG224)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d1i9ga_ :    (GLU11)  (THR258)   [view usage] : c.66.1.13 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |tRNA(1-methyladenosine) methyltransferase-like |Probable methyltransferase Rv2118c |Mycobacterium tuberculosis [TaxId: 1773]
 d3mb5a_ :     (ASP6)  (GLU255)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Pyrococcus abyssi [TaxId: 29292]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66