Protein Concepts Dictionary

Tableau information

Concept source:  d4mwla_  amino acid (a.a.) range (LEU159)(LYS379)

nSSEs in this Concept: 20

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU159)  (PRO163) E1
	  (SER173)  (CYS177) E2
	  (SER182)  (GLY188) E3
	  (ARG191)  (ILE196) E4
	  (SER204)  (ASN210) E5
	  (VAL214)  (THR219) E6
	  (LEU225)  (SER230) E7
	  (SER230)  (ASN236) E8
	  (GLY237)  (GLY246) E9
	  (ALA252)  (LYS260) E10
	  (LEU265)  (SER269) E11
	  (LYS275)  (GLU279) E12
	  (GLU279)  (GLY284) E13
	  (GLY288)  (TRP297) E14
	  (PRO303)  (ASP308) E15
	  (MET312)  (PRO322) E16
	  (ASN334)  (ASN339) E17
	  (ASN347)  (ASP357) E18
	  (THR361)  (ARG365) E19
	  (GLY374)  (LYS379) E20

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                          
E2      149.2°   E2                                                                                                                                   
E3      -51.0°   98.9°   E3                                                                                                                            
E4      144.8°  -65.0°  164.0°   E4                                                                                                                     
E5      -31.5°  121.9°  -25.5°  167.6°   E5                                                                                                              
E6      132.5°  -67.4°  146.8°  -28.8°  160.2°   E6                                                                                                       
E7       12.0°  146.0°   53.7° -140.7°   39.3°  122.6°   E7                                                                                                
E8      -80.2°   69.6°  -29.3°  134.7°  -53.4°  127.4°   81.4°   E8                                                                                         
E9      134.9°  -73.8°  169.8°  -11.0°  163.8°  -23.7°  129.8°  142.8°   E9                                                                                  
E10     -52.7°  104.4°  -26.3°  153.3°  -21.8°  170.4°  -61.2°  -43.1°  161.6°   E10                                                                          
E11     117.9°  -78.9°  139.2°  -41.4°  145.8°  -14.8°  107.8°  128.9°  -33.4°  164.9°   E11                                                                   
E12      50.4° -136.9°   74.6° -116.7°   50.9° -136.3°   61.7°  -96.1° -115.6°   53.1° -133.2°   E12                                                            
E13     -49.6°   99.6°    9.9°  161.9°  -30.1°  138.2°  -49.8°   31.6°  161.9°  -35.8°  129.5°  -80.9°   E13                                                     
E14     127.7°  -82.0°  177.2°  -17.1°  154.6°  -31.4°  124.4° -151.6°   -9.4°  156.0°  -38.2°  106.5°  167.4°   E14                                              
E15     -74.8°   78.4°  -27.3°  139.4°  -43.9°  143.3°  -79.9°  -19.2°  150.2°  -27.3°  147.6°  -78.5°  -35.1°  155.1°   E15                                       
E16      75.6° -121.5°  116.4°  -74.7°  106.5°  -57.3°   67.2°  133.2°  -63.7°  128.2°  -43.6°   98.3°  108.4°  -61.0°  143.5°   E16                                
E17    -124.0°   42.1°  -80.8°   86.6°  -93.0°  103.3° -132.1°  -58.4°   97.7°  -71.4°  117.3°  -95.4°  -87.5°  101.6°  -53.5°  160.4°   E17                         
E18     -46.5°  103.0°   18.0°  159.2°  -33.2°  132.1°  -44.6°   37.9°  155.3°  -42.9°  122.1°  -83.8°   -8.5°  159.1°  -43.4°  100.1°  -95.2°   E18                  
E19     110.7°  -99.6°  151.7°  -40.5°  127.7°  -61.2°  113.7° -156.3°  -38.5°  126.8°  -65.9°   77.2°  157.6°  -29.8°  141.0°  -70.5°   99.1°  157.2°   E19           
E20     -77.5°   73.8°  -41.5°  127.4°  -64.8°  105.5°  -72.2°  -32.2°  128.3°  -66.4°  101.2° -115.6°  -34.7°  136.9°  -50.1°  102.7°  -83.7°  -33.0°  166.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4qn3a_ :    (GLY75)  (LYS297)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Influenza a virus (a/mallard/alb/196/1996(h10n7)) [TaxId: 352589]
 d1v0za_ :   (LEU164)  (LYS385)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d2bata_ :   (THR157)  (GLY381)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d1nman_ :   (LEU158)  (LYS378)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d4gezk_ :   (GLU145)  (ASN367)   [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
 d1ncbn_ :   (LEU158)  (LYS378)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d4h53a_ :   (THR157)  (GLY381)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Influenza a virus [TaxId: 382827]
 d1inya_ :   (LEU158)  (LYS378)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d1nnaa_ :   (LEU159)  (LYS379)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d1ncdn_ :   (LEU158)  (THR365)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d1ncan_ :   (LEU158)  (LYS378)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d5nn9a_ :   (LEU158)  (PRO380)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d4hzva_ :   (LEU158)  (VAL398)   [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
 d4nn9a_ :   (LEU158)  (LYS378)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d3nn9a_ :   (LEU158)  (PRO380)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d4fvka_ :   (SER157)  (GLN378)   [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]
 d1nmbn_ :   (LEU158)  (LYS378)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d1nccn_ :   (LEU158)  (ARG364)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d1a14n_ :   (TYR155)  (LYS378)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Influenza neuraminidase |Influenza A virus, different strains [TaxId: 11320]
 d4b7ja_ :   (LEU158)  (PRO377)   [view usage] : b.68.1.0 |6-bladed beta-propeller |Sialidases |automated matches |automated matches |Influenza A virus [TaxId: 11320]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.68