Protein Concepts Dictionary

Tableau information

Concept source:  d2oura_  amino acid (a.a.) range (TRP486)(ILE744)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TRP486)  (GLY499) H1
	  (GLY499)  (GLU504) H2
	  (LEU505)  (ASN518) H3
	  (VAL522)  (ASN544) H4
	  (ASN544)  (THR549) H5
	  (THR549)  (GLY555) H6
	  (LEU556)  (CYS562) H7
	  (SER571)  (ASP579) H8
	  (HIS580)  (TYR586) H9
	  (SER589)  (LEU605) H10
	  (ASN609)  (SER615) H11
	  (SER615)  (THR633) H12
	  (ASP634)  (GLY652) H13
	  (GLN659)  (CYS676) H14
	  (CYS676)  (LYS680) H15
	  (TRP682)  (GLY707) H16
	  (ASP715)  (VAL722) H17
	  (VAL722)  (ALA732) H18
	  (ALA734)  (ILE744) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
H2      111.5°   H2                                                                                                                            
H3      135.6°   76.3°   H3                                                                                                                     
H4       23.8°  132.7°  139.3°   H4                                                                                                              
H5      -75.5°   36.3°   98.7°  -98.0°   H5                                                                                                       
H6      174.5°  -67.3°  -39.1° -159.1°  102.7°   H6                                                                                                
H7      161.2°  -63.0°  -27.9°  163.3°   95.9°   13.4°   H7                                                                                         
H8     -106.6°   27.2°   60.0° -130.4°   39.0°   69.7°   59.6°   H8                                                                                  
H9      -14.2°  101.6° -124.9°  -37.2°   65.3° -160.8° -147.6°  -93.2°   H9                                                                           
H10     -81.9°  -77.5°  140.4°  -79.8°  -76.2°  102.8°  112.7°  103.3°   89.2°   H10                                                                   
H11     -10.9°  101.0° -138.1°   32.8°  -65.4° -168.0° -157.7°  -98.8°   13.5°  -76.0°   H11                                                            
H12     127.9° -101.4°  -25.6°  120.0°  122.8°  -48.7°  -43.7°  -85.0° -123.7°  145.9°  136.1°   H12                                                     
H13      29.5°  139.8° -121.8°   17.5°  103.5° -150.1° -147.5° -126.8°   38.2°  -97.2°   40.4° -104.0°   H13                                              
H14     153.1°  -93.6°  -58.3°  129.2° -129.8°  -30.5°  -42.1°  100.2° -164.9°   94.5°  160.3°  -51.4° -126.6°   H14                                       
H15     109.5° -135.0°  -87.2°   85.8° -165.5°  -73.5°  -83.0° -142.7°  121.8°   90.8°  118.2°  -65.6°  -84.3°  -43.6°   H15                                
H16    -115.9°   29.0°   51.8° -139.4°   48.1°   60.3°   50.0°    9.6° -102.2°  106.6° -108.3°  -77.2° -133.8°   90.8° -133.0°   H16                         
H17      57.6°  168.8° -109.5°   37.3°  132.6° -123.3° -126.4°  147.9°   67.3° -101.7°   68.2°   85.5°   29.0°  -97.6°  -55.8°  149.8°   H17                  
H18      -9.5°  102.1°  136.7°  -32.2°   66.2°  168.6°  157.3°   99.0°   11.9°  -77.9°   -1.9°  134.1°   39.0° -160.5° -117.9°  108.5°  -67.1°   H18           
H19      27.7°  113.2°  162.1°  -24.2°   83.4° -157.7° -170.0°  121.7°   40.3°  -57.4°   28.3°  143.7°   41.2° -132.6°  -95.1°  131.2°  -58.7°  -29.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4aelb_ :   (TRP486)  (PRO750)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4dffa_ :   (PRO465)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4lm3a_ :   (LEU468)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4lkqb_ :   (TRP486)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2o8ha_ :   (PHE472)  (ILE756)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3dy8a_ :   (PRO208)  (PRO473)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Human (Homo sapiens) [TaxId: 9606]
 d4ajmd_ :   (TRP486)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3sn7a_ :   (TRP476)  (GLY758)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ousa_ :   (TRP486)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ms0b_ :   (TRP486)  (ALA732)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ajma_ :   (TRP486)  (PRO750)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ajga_ :   (PRO465)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2yy2b_ :   (GLU207)  (PRO473)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4ajda_ :   (CYS469)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4lm1a_ :   (TRP486)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ouna_ :   (TRP486)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4mshb_ :   (TRP486)  (ALA732)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3lxga_ :   (LEU464)  (PRO740)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2oura_ :   (TRP486)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bbxa_ :   (TRP476)  (ILE734)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ouya_ :   (CYS469)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4msca_ :   (PRO465)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ouva_ :   (LEU468)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3wylb_ :   (TRP476)  (LEU741)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ouqa_ :   (TRP486)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2y0ja_ :   (TRP476)  (ILE734)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4lkqa_ :   (LEU468)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4msha_ :   (CYS469)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4aela_ :   (TRP486)  (PRO750)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4llja_ :   (CYS469)  (ILE744)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ui7a_ :   (TRP486)  (PRO750)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.211