Protein Concepts Dictionary

Tableau information

Concept source:  d1onra_  amino acid (a.a.) range (PRO36)(LEU317)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HHHEHHEHEHEHHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO36)   (ALA43) H1
	   (ILE45)   (GLN62) H2
	   (ASP65)   (VAL89) H3
	   (GLY91)   (GLU96) E4
	   (ASP98)  (ASP104) H5
	  (THR105)  (GLY123) H6
	  (ARG128)  (ALA134) E7
	  (THR136)  (GLY150) H8
	  (ASN152)  (LEU157) E9
	  (SER160)  (GLY171) H10
	  (PHE173)  (PHE178) E11
	  (GLY180)  (THR190) H12
	  (ASP200)  (GLY217) H13
	  (VAL221)  (PHE227) E14
	  (ILE230)  (ALA237) H15
	  (ASP240)  (ALA245) E16
	  (PRO246)  (SER255) H17
	  (THR277)  (ASP288) H18
	  (ASP288)  (LEU317) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
H2     -105.7°   H2                                                                                                                            
H3       88.9°  134.0°   H3                                                                                                                     
E4      -99.3°  -66.3°  155.1°   E4                                                                                                              
H5      167.8°   62.1°  -99.8°  -76.3°   H5                                                                                                       
H6       44.5°  103.3°  -58.1°  140.3° -134.8°   H6                                                                                                
E7     -112.7°  -87.0°  127.6°  -27.9°  -68.5°  156.7°   E7                                                                                         
H8       81.7°   74.7°  -64.5°  139.8°   94.3°  -41.5°  159.5°   H8                                                                                  
E9       95.6° -117.2°  103.9°  -52.2°  -90.6°  130.7°  -31.2° -168.0°   E9                                                                           
H10     -91.5°   56.4°  -80.4°  122.5°   81.7°  -57.5°  141.1°  -18.8°  171.8°   H10                                                                   
E11      77.2° -131.5°   93.9°  -65.5° -110.4°  110.0°  -50.5°  150.0°  -20.7° -167.5°   E11                                                            
H12     102.7° -107.5°  111.3°  -44.0°  -82.2°  140.7°  -20.8° -174.1°   10.5°  161.5°   30.8°   H12                                                     
H13    -121.0°   57.1°  -77.8°  116.4°   53.7°  -81.9°  120.8°  -40.7°  143.3°  -30.0°  159.3°  135.8°   H13                                              
E14      57.2° -122.3°  102.5°  -64.0° -127.8°   96.7°  -60.5°  137.8°  -38.4°  148.2°  -22.5°  -45.8° -178.2°   E14                                       
H15    -130.5°   76.9°  -61.4°  124.7°   49.8°  -86.2°  116.8°  -50.6°  127.9°  -47.9°  138.1°  124.1°  -22.5°  158.9°   H15                                
E16      36.7° -102.3°  113.9°  -65.2° -141.4°   81.3°  -76.1°  116.3°  -64.3°  120.7°  -51.5°  -68.8°  149.1°  -29.2° -166.9°   E16                         
H17     -88.7°  143.5°   10.2°  145.4°  101.4°  -64.0°  118.5°  -74.5°   93.7°  -90.6°   83.9°  101.4°  -86.6°   93.9°  -68.5° -108.7°   H17                  
H18     -63.8° -148.9°   76.7°  -85.8° -126.3°   89.2°  -72.4°  128.1°  -41.9° -146.3°  -21.9°  -52.2°  153.9°  -26.8°  133.0°  -50.9°   67.6°   H18           
H19      32.2°  -73.9°  107.8°  -90.7° -135.7°   50.3° -115.4°   68.7°  114.5°  -70.0°  101.6°  117.0°  -99.0°   79.2° -117.5°   50.7° -112.0°  -93.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3igxa_ :    (PRO37)  (ASN320)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Francisella tularensis [TaxId: 177416]
 d1i2pa_ :    (ILE45)  (LYS294)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
 d1i2ra_ :    (ILE45)  (LYS294)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
 d1i2na_ :    (PRO36)  (LEU317)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
 d1onra_ :    (PRO36)  (LEU317)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
 d3tk7a_ :    (PRO37)  (GLN319)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Francisella tularensis [TaxId: 119856]
 d3igxb_ :    (PRO37)  (LEU321)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Francisella tularensis [TaxId: 177416]
 d1f05a_ :    (ASN45)  (GLN302)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Human (Homo sapiens) [TaxId: 9606]
 d1i2oa_ :    (ILE45)  (LEU317)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]
 d3cwna_ :    (PRO36)  (LEU317)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 562]
 d3kofa_ :    (PRO36)  (LEU317)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2e1db_ :    (PRO46)  (GLN302)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2cwna1 :    (MET55)  (GLN302)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Mouse (Mus musculus) [TaxId: 10090]
 d2e1da_ :    (PRO46)  (GLN302)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1i2qa_ :    (ILE45)  (LEU317)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Transaldolase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1