Tableau information
Concept source: d1frfl_ amino acid (a.a.) range (ASP246)(ASP541)
nSSEs in this Concept: 19
String of secondary struct.elems. (SSEs) defining this concept: HHHEHEEEHHHHHEEEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP246) (ASN263) H1
(ILE267) (TYR277) H2
(TYR277) (ILE283) H3
(SER287) (PHE292) E4
(SER301) (ALA307) H5
(GLY314) (GLY318) E6
(ILE332) (VAL336) E7
(TRP370) (TYR376) E8
(PRO385) (GLY396) H9
(GLN397) (LEU411) H10
(PRO414) (SER420) H11
(SER420) (ASN438) H12
(GLU440) (LYS452) H13
(SER466) (ALA472) E14
(GLY477) (GLY487) E15
(ASP491) (VAL497) E16
(VAL497) (ASN502) H17
(SER513) (LEU519) H18
(VAL531) (ASP541) H19
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 23.5° H2
H3 -107.7° -84.8° H3
E4 -170.8° 165.6° 81.1° E4
H5 -45.5° -67.0° -136.0° 126.1° H5
E6 19.5° 6.7° -90.5° -169.3° -64.6° E6
E7 70.6° 64.2° 90.3° -112.8° 105.5° 60.4° E7
E8 -87.5° -85.9° -72.9° 92.7° -72.0° -91.1° 147.2° E8
H9 -93.4° -95.4° -80.8° -85.2° -69.6° 99.9° 158.5° 11.8° H9
H10 -24.8° -44.3° -128.1° 148.5° -43.6° -38.1° 62.1° -106.3° -108.7° H10
H11 108.3° 100.0° 81.6° 75.2° 134.4° -97.2° -37.8° 153.2° -155.4° 95.7° H11
H12 -145.6° -162.7° -98.3° -26.3° 100.2° 164.0° -132.5° 78.8° 68.5° 133.2° -97.3° H12
H13 175.2° 151.8° 67.6° -13.9° 138.3° -156.1° -108.4° 91.4° 86.4° -158.9° -71.1° -38.2° H13
E14 -50.9° -74.4° -153.6° -119.9° 18.8° 70.1° 94.9° -89.3° -85.2° 38.1° 117.4° -97.2° -133.7° E14
E15 140.9° 118.1° 41.5° 48.0° 170.5° -121.4° -84.0° 99.9° 101.4° -145.8° -54.3° -73.0° 34.9° 164.8° E15
E16 -38.0° -60.9° -137.7° -133.0° -10.1° 57.5° 95.4° -80.2° 78.8° 33.5° 125.5° -108.0° -146.1° -16.1° 179.0° E16
H17 -19.9° -7.7° 87.8° 168.2° -60.6° -11.0° 71.1° -80.1° 88.9° -43.3° -107.4° 155.1° 155.4° -69.6° 123.7° -55.2° H17
H18 18.6° 42.1° 125.9° -152.3° -30.9° 37.5° 76.8° -90.3° 92.6° -16.1° -111.6° -129.1° -166.2° -32.5° -157.4° 21.6° 38.1° H18
H19 -150.7° -142.7° -67.2° -30.2° 117.1° -149.4° -136.0° 63.2° 57.6° 160.1° -99.6° 32.1° 28.8° 122.3° -53.7° 127.0° 139.9° 147.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1frfl_ : (ASP246) (ASP541) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio fructosovorans [TaxId: 878]
d1yqwr_ : (ASP246) (ASP541) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1yqwq_ : (ASP246) (ASP541) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1yrqj_ : (ASN239) (ASP541) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d3curh_ : (ASP246) (ASP541) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |automated matches |Desulfovibrio fructosovorans [TaxId: 878]
d1e3db_ : (CYS236) (ASP534) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfovibrio desulfuricans [TaxId: 876]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.18