Protein Concepts Dictionary

Tableau information

Concept source:  d1w8se_  amino acid (a.a.) range (PRO31)(GLY254)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEEEHEHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO31)   (ASN37) H1
	   (ASN37)   (PRO43) H2
	   (PRO43)   (GLY54) H3
	   (ASP56)   (GLN61) E4
	   (GLN61)   (LYS67) H5
	   (PRO74)   (LEU79) E6
	   (LEU79)   (THR83) E7
	   (PRO90)   (CYS96) E8
	   (SER97)  (GLY105) H9
	  (ALA108)  (GLY116) E10
	  (PHE119)  (LYS136) H11
	  (PRO140)  (PHE146) E12
	  (ALA157)  (GLY172) H13
	  (ASP174)  (LYS179) E14
	  (ASP183)  (ALA194) H15
	  (PRO198)  (GLY204) E16
	  (GLU211)  (ALA223) H17
	  (LEU226)  (ARG232) E18
	  (LEU241)  (GLY254) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
H2      133.0°   H2                                                                                                                            
H3       63.8°  -99.4°   H3                                                                                                                     
E4     -133.2°  -73.4°  161.8°   E4                                                                                                              
H5      -52.2°   83.2°  -81.4°  113.6°   H5                                                                                                       
E6     -144.6°  -76.8°  139.9°  -23.0° -136.2°   E6                                                                                                
E7       84.4° -135.6°  121.3°  -62.4°  117.3°  -61.1°   E7                                                                                         
E8      -83.6°   50.9°  -88.3°   99.2°  -32.3°  116.2°  138.0°   E8                                                                                  
H9      -25.0°  108.6°  -67.7°  130.2°   27.5°  151.8°  103.0°   58.6°   H9                                                                           
E10     117.7° -108.9°  105.2°  -63.1°  164.5°  -43.2°   47.3° -158.1°  142.4°   E10                                                                   
H11     -71.7°   62.4°  -60.7°  125.8°   35.6°  138.3° -152.1°   27.7°  -50.1° -159.2°   H11                                                            
E12      94.1° -132.3°  109.4°  -67.3°  137.0°  -56.6°   21.7°  159.0°  117.0°  -27.8° -165.1°   E12                                                     
H13    -113.3°   19.8°  -91.8°   86.2°  -63.8°   94.5°  146.9°  -31.6°  -88.8°  128.7°  -43.9°  151.0°   H13                                              
E14      70.6° -153.0°  104.2°  -80.1°  112.8°  -76.7°  -17.7°  141.5°   92.4°  -52.3°  142.1°  -24.9°  163.1°   E14                                       
H15    -131.0°    4.4°  -95.1°   77.6°  -82.6°   80.1°  139.6°  -50.4° -107.2°  110.2°  -59.7°  134.8°  -18.8°  156.7°   H15                                
E16      73.6° -131.8°  128.2°  -63.1°   95.5°  -71.3°  -22.8°  115.7°   86.1°  -69.4°  131.0°  -44.4°  133.1°  -30.4°  136.2°   E16                         
H17    -122.1°   47.5°  -60.8°  104.1° -103.0°   91.5°  139.6°  -79.2° -112.8°   92.3°  -67.7°  118.8°  -54.6°  138.7°  -43.8°  160.8°   H17                  
E18      81.2° -111.2°  144.0°  -52.0°   83.9°  -68.2°  -41.9°   96.5°   84.5°  -82.7°  117.8°  -62.7°  110.7°  -52.7°  115.4°  -22.4°  155.1°   E18           
H19     105.0°  -69.8°  -41.2°  121.5° -105.5°  103.6°  130.7°  -91.3° -104.2°   88.1°  -71.2°  109.4°  -73.6°  122.2°  -66.0°  152.3°  -22.8°  170.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ycee_ :    (HIS25)  (GLY253)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
 d1w8se_ :    (PRO31)  (GLY254)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermoproteus tenax [TaxId: 2271]
 d2yceb_ :    (PRO31)  (GLY253)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
 d1ojxa_ :    (PRO31)  (VAL251)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
 d1ojxe_ :    (PRO31)  (GLY254)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
 d1w8sa1 :    (PRO31)  (VAL251)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
 d2qjga_ :    (HIS34)  (ASN260)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 2190]
 d1ok6b_ :    (PRO31)  (GLY253)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
 d1ok6a_ :    (PRO31)  (LEU250)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]
 d2ycea1 :    (HIS25)  (LEU250)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Archaeal fructose 1,6-bisphosphate aldolase |Thermoproteus tenax [TaxId: 2271]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1