Protein Concepts Dictionary

Tableau information

Concept source:  d2j5gk_  amino acid (a.a.) range (THR39)(ASP249)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEEHHHEHEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR39)   (ASP56) H1
	   (ARG60)   (GLY66) E2
	   (ASP76)   (GLY81) H3
	   (ASN85)  (ILE106) H4
	  (PRO109)  (ASN115) E5
	  (SER122)  (THR128) H6
	  (ASP129)  (GLU135) E7
	  (ASN136)  (GLN140) E8
	  (PRO143)  (GLY148) H9
	  (GLY154)  (LEU163) H10
	  (TYR166)  (GLN175) H11
	  (GLN175)  (THR179) E12
	  (THR179)  (ASN187) H13
	  (HIS190)  (PRO194) E14
	  (PRO194)  (LEU198) H15
	  (LEU198)  (ALA210) H16
	  (PRO213)  (THR225) H17
	  (THR225)  (GLY235) H18
	  (GLY237)  (ASP249) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
E2      163.6°   E2                                                                                                                            
H3      -77.6° -118.8°   H3                                                                                                                     
H4       28.4° -135.2°  106.0°   H4                                                                                                              
E5      144.5°  -20.2°  135.5°  117.3°   E5                                                                                                       
H6      -14.8° -153.9°   84.2°  -24.6° -140.2°   H6                                                                                                
E7      130.8°  -33.7°  147.9°  103.7°  -13.8° -127.1°   E7                                                                                         
E8     -106.0°   88.3°  -42.3° -128.1°  108.5° -103.9° -121.7°   E8                                                                                  
H9     -146.4°   48.5°  -73.4° -161.9°   68.6° -142.4°  -82.2°   40.4°   H9                                                                           
H10      62.4° -103.7°  129.0°   39.2°  -93.0°   50.2°  -82.5° -119.7° -127.2°   H10                                                                   
H11     147.2°   36.8°  -98.5°  140.4°   40.2°  160.2°   49.8°  -90.8°  -55.7°  132.3°   H11                                                            
E12      55.3° -109.2°  128.2°   31.5°  -89.3°   55.8°  -75.6°  159.5° -157.6°   47.2° -109.5°   E12                                                     
H13     -41.4°  145.0°  -60.6°  -59.0° -154.2°  -35.0° -149.4°   69.1°  107.7°   68.4° -157.9°   90.4°   H13                                              
E14     115.5°  -54.2°  131.9°   96.8°  -36.9°  120.6°  -30.6°  135.1°  -96.6°  -95.0°   44.6°  -65.3° -155.6°   E14                                       
H15      57.7° -136.9°   29.1°   84.8° -143.5°   69.3° -146.8°   71.3°  -99.7°  119.5° -104.1°  100.4°   61.7°  117.5°   H15                                
H16     -28.7°  166.5°  -50.3°   56.2°  173.2°   34.0°  159.5°  -78.2° -118.2°   82.6° -142.7°   83.9°   27.0°  138.0°  -38.7°   H16                         
H17    -130.3°   56.6°  -85.2°  131.1°   74.4°  118.9°  -84.6°  -42.9°  -31.5°   97.0°  -80.9°  140.4°   89.7° -110.7° -114.2°  111.3°   H17                  
H18    -148.0°   48.3°  -70.9° -172.2°   67.3°  148.8°   81.1°   44.9°   11.1°  137.4°  -47.3° -155.4°  114.0°  -90.4°  -94.5° -119.4°   42.5°   H18           
H19    -170.5°   20.0° -100.8°  152.1°   35.1°  173.7°   48.6°   77.9°   38.1°  123.6°  -23.3° -122.0°  145.5°  -58.6° -116.9° -151.1°   58.4°   33.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j5gd_ :    (PHE46)  (ASP249)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d2j5gk_ :    (THR39)  (ASP249)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d2j5sa_ :    (GLU45)  (LEU250)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d2j5ga_ :    (GLU45)  (LEU250)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]
 d2j5gb_ :    (GLU45)  (LEU250)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Nostoc sp. PCC 7120 [TaxId: 103690]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14