Protein Concepts Dictionary

Tableau information

Concept source:  d2nrba1  amino acid (a.a.) range (ARG263)(PRO471)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HEHEEEHEEEHHEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG263)  (PHE274) H1
	  (TYR279)  (ILE284) E2
	  (GLY285)  (ILE294) H3
	  (THR299)  (GLU305) E4
	  (GLU330)  (PRO336) E5
	  (GLY337)  (SER342) E6
	  (SER342)  (GLY353) H7
	  (ASN356)  (GLY361) E8
	  (MET363)  (LYS367) E9
	  (TYR368)  (TRP374) E10
	  (ILE376)  (VAL381) H11
	  (GLY386)  (SER392) H12
	  (LYS397)  (MET402) E13
	  (GLU415)  (LEU419) E14
	  (ASN428)  (GLU433) E15
	  (ALA435)  (ASP440) E16
	  (GLY444)  (TRP451) E17
	  (VAL456)  (SER462) H18
	  (CYS465)  (PRO471) E19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
E2      167.6°   E2                                                                                                                            
H3      -59.7° -129.5°   H3                                                                                                                     
E4      109.1°  -59.1° -157.0°   E4                                                                                                              
E5      -26.7°  164.0°   34.5° -135.6°   E5                                                                                                       
E6      103.4°  -65.9°  160.7°  -12.9° -130.0°   E6                                                                                                
H7       83.3° -105.5°   80.6° -119.8°   73.9° -108.2°   H7                                                                                         
E8      173.5°   -8.0°  126.7°  -64.7°  159.6°  -70.1°  -97.9°   E8                                                                                  
E9       60.5° -125.0°  -82.6°  110.4°  -60.9°   97.4°  -27.4° -118.7°   E9                                                                           
E10    -119.3°   52.6° -107.5°  -58.3° -124.8°  -71.2°  157.1°   59.9°  168.6°   E10                                                                   
H11     -73.9°  102.1°  -63.6°  -94.6°  -73.1° -104.5°  143.7°  107.9° -132.8°   51.8°   H11                                                            
H12      45.9° -143.9°   57.5°  131.4°   37.0°  119.0°  -38.5° -136.1°  -25.6°  161.8°  110.1°   H12                                                     
E13    -172.2°  -18.0°  112.8°  -77.0°  146.5°  -83.6°  -97.9°  -14.1° -122.6°   59.3°  101.2° -133.4°   E13                                              
E14    -103.8°   66.3° -110.0°  -50.3° -116.0°  -62.5° -169.1°   74.1° -152.4°   18.8°  -47.2° -149.6°   76.2°   E14                                       
E15     142.7°  -46.6°   83.2° -103.8°  117.4° -112.3°   95.3°  -43.7° -122.5°   65.4°   86.7°  118.3°  -29.6°   84.1°   E15                                
E16     -44.0°  126.8° -103.5°   70.3°  -69.2°   61.4°  -85.2°  129.6°   58.5° -112.6°  -96.9°  -65.8°  143.6°  -94.2°  173.2°   E16                         
E17     110.9°  -77.2°   52.4° -128.0°   86.9° -139.6°   96.6°  -75.3° -117.6°  -73.7°   66.9°  100.3°  -61.3°   88.6°  -32.0°  154.7°   E17                  
H18    -103.4°   64.4° -148.3°   -8.7° -129.3°  -18.5° -126.6°   70.7° -113.9°   54.7°   86.7° -132.0°   82.1°   44.1°  106.9°  -67.7°  127.3°   H18           
E19      56.6° -134.9°  -16.7°  165.5°   30.0°  158.3°   64.3° -129.6°   66.4° -124.0°   79.4°   42.1° -116.9° -126.4°  -89.1°   97.1°  -61.8°  158.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3k6ma2 :   (VAL262)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |Succinate:CoA transferase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d1ooyb1 :   (VAL262)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |Succinate:CoA transferase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d2nrba1 :   (ARG263)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |Succinate:CoA transferase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d3oxoa2 :   (VAL262)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.124