Protein Concepts Dictionary

Tableau information

Concept source:  d1mnza_  amino acid (a.a.) range (VAL151)(LEU383)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HEEHEHHEEEHEHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL151)  (GLY173) H1
	  (ARG177)  (LYS183) E2
	  (GLY189)  (LEU193) E3
	  (THR195)  (LEU206) H4
	  (LEU211)  (GLU217) E5
	  (GLU217)  (MET223) H6
	  (PHE228)  (GLY239) H7
	  (PHE242)  (ASN247) E8
	  (ASN247)  (GLY251) E9
	  (TYR254)  (ARG259) E10
	  (LEU265)  (GLY279) H11
	  (ARG284)  (PHE288) E12
	  (ASP295)  (ALA322) H13
	  (PRO324)  (ARG334) H14
	  (ARG334)  (ARG340) H15
	  (LEU347)  (ASP353) H16
	  (ARG354)  (PHE360) H17
	  (VAL362)  (ARG368) H18
	  (GLU373)  (LEU383) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
E2      154.1°   E2                                                                                                                            
E3      -49.8° -145.7°   E3                                                                                                                     
H4      -61.1°  143.3°  -49.0°   H4                                                                                                              
E5      118.0°  -36.2° -139.8°  169.3°   E5                                                                                                       
H6     -163.6°   40.9° -114.1°  107.0°  -75.9°   H6                                                                                                
H7      -50.1°  155.8°   30.7°  -18.8° -167.0°  115.1°   H7                                                                                         
E8      119.4°  -35.1° -149.9°  158.7°  -10.9°  -76.0° -168.4°   E8                                                                                  
E9     -168.7°   29.8° -120.9°  119.6°   63.6°   12.6°  126.7°   64.6°   E9                                                                           
E10     -31.6°  126.7°   59.2°  -90.1°   92.0°  149.7°  -75.0°   97.2°  141.3°   E10                                                                   
H11     -39.4°  162.6°   18.4°  -35.2° -150.6°  124.3°  -16.8° -156.8°  133.9°  -59.6°   H11                                                            
E12     132.2°  -37.7°  170.7°  122.3°  -49.3°  -63.0°  140.9°  -39.4°   58.2° -128.1°  155.4°   E12                                                     
H13     -87.7°  101.5°  -44.3°  -84.0°  106.7°   79.4°  -70.2°  117.1°   81.3°  -77.7°  -62.5°  138.4°   H13                                              
H14    -131.0°   74.6°  -86.4°  -74.0°  109.7°   33.9°  -81.2°  109.6°   46.1° -143.3°  -92.0°   87.5°  -68.1°   H14                                       
H15     -80.1°  123.5°  -64.6°  -19.8°  155.2°   89.7°  -37.1°  145.6°  102.1° -109.8°  -53.9°  106.2°  -89.9°   58.9°   H15                                
H16     134.7°  -41.9°  104.8° -136.1°   53.1°  -45.2°  129.0°  -60.9°  -36.0°  105.5°  123.1°  -79.5°   60.7°  -69.1° -127.1°   H16                         
H17     150.6°  -18.5° -127.7° -144.6°   40.4°  -38.0° -147.0°   44.5°  -25.5°  119.1°  145.6°  -56.2°   83.4°  -70.6° -127.6°  -23.3°   H17                  
H18      72.2°  -84.5°  120.1°  117.5°  -54.7° -124.2°  117.9°  -50.5° -114.3°   63.7°  111.4°  -65.4°  134.5° -152.8° -124.3°  106.2°  -94.6°   H18           
H19      55.4° -103.9°  105.2°   96.4°  -75.9° -140.6°   97.3°  -71.2° -133.0°   57.6°   93.0°  -77.8°  135.3° -154.7° -105.3°  126.8° -115.6°   21.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1muwa_ :   (ARG151)  (LEU383)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces olivochromogenes [TaxId: 1963]
 d1mnza_ :   (VAL151)  (LEU383)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
 d4j4ka_ :   (ARG152)  (LEU384)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
 d2xina_ :   (VAL151)  (GLY392)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]
 d1xyaa_ :   (ARG151)  (GLY384)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces olivochromogenes [TaxId: 1963]
 d8ximc_ :   (VAL151)  (GLY392)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]
 d1qt1a_ :   (ASP149)  (LEU382)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces diastaticus, M1033 [TaxId: 1956]
 d3xima_ :   (VAL151)  (GLY392)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]
 d1xyla_ :   (VAL150)  (GLY384)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces olivochromogenes [TaxId: 1963]
 d2xima_ :   (VAL151)  (GLY392)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]
 d2xisa_ :   (VAL151)  (LEU384)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces rubiginosus [TaxId: 1929]
 d2gyib_ :   (VAL150)  (GLY384)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Streptomyces olivochromogenes [TaxId: 1963]
 d3ximb_ :   (VAL151)  (GLY392)   [view usage] : c.1.15.3 |TIM beta/alpha-barrel |Xylose isomerase-like |Xylose isomerase |D-xylose isomerase |Actinoplanes missouriensis [TaxId: 1866]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1