Protein Concepts Dictionary

Tableau information

Concept source:  d1jwva_  amino acid (a.a.) range (PRO27)(TRP290)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HEEEHHHHHEHEHHHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO27)   (GLY41) H1
	   (ALA42)   (ASP50) E2
	   (LEU57)   (ARG61) E3
	   (GLU64)   (MET69) E4
	   (MET69)   (GLY87) H5
	  (SER106)  (HIS112) H6
	  (THR118)  (SER130) H7
	  (ASN132)  (ILE142) H8
	  (PRO145)  (GLY156) H9
	  (THR160)  (ARG164) E10
	  (GLU166)  (GLU171) H11
	  (ASP179)  (MET182) E12
	  (MET182)  (LEU194) H13
	  (THR200)  (ASP214) H14
	  (ASP214)  (LEU220) H15
	  (TRP229)  (ALA238) E16
	  (GLY242)  (PRO252) E17
	  (ILE260)  (THR266) E18
	  (THR271)  (TRP290) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
E2      157.9°   E2                                                                                                                            
E3      -21.2° -158.2°   E3                                                                                                                     
E4       68.6°  -92.8°   87.7°   E4                                                                                                              
H5     -119.8°   40.4° -119.7°  -75.1°   H5                                                                                                       
H6      -74.4°   83.7°  -86.9°  -27.5°   53.2°   H6                                                                                                
H7       80.9° -120.1°   77.4°  121.0° -158.6°  146.3°   H7                                                                                         
H8     -108.2°   63.9°  -94.9° -105.2°   40.3°   78.0° -132.4°   H8                                                                                  
H9     -154.1°   45.9° -134.5°  137.3°   76.6°  128.2°  -82.1°   70.2°   H9                                                                           
E10      29.4° -129.3°   47.0°  -40.7°  -96.7°  -46.0°  104.6° -103.2° -172.9°   E10                                                                   
H11     -94.5°  107.2°   81.2° -151.4°  133.2° -168.1°  -30.7°  101.9°  -61.7°  123.5°   H11                                                            
E12    -127.1°   75.0° -116.1°  143.8°  110.7°  157.0°  -48.0°   99.7°   34.5°  152.5°  -35.0°   E12                                                     
H13     124.6°  -34.5°  137.4°  -58.8°   32.5°   51.0° -140.8°   72.4°   80.4°  -95.3° -140.6° -106.2°   H13                                              
H14      56.3° -134.8°   66.8°   80.6°  154.2°  105.4°  -41.0° -160.9° -118.1°   69.0°  -70.8°  -84.5° -124.6°   H14                                       
H15      91.8° -109.7°   86.0°  130.4° -146.9°  157.2°   11.9° -124.3°  -70.3°  116.4°  -23.1°  -36.2° -135.1°  -52.0°   H15                                
E16     -22.3°  154.7°   -3.6°   86.9°  116.1°  -84.6°   80.7°  -91.8° -134.6°   46.3°  -83.4° -118.4°  134.7°   70.1°   89.1°   E16                         
E17     161.9°  -14.6° -172.7°  -93.4°   54.0°   90.7° -108.0°   77.9°   43.9° -133.4°  101.0°   66.5°  -39.7° -120.5°  -98.7°  169.3°   E17                  
E18     -19.9°  173.8°   15.6°   87.6° -134.2°  -94.0°   64.5° -110.0° -134.7°   49.3°  -74.7° -108.1°  144.5°   51.4°   74.4°  -19.1°  171.5°   E18           
H19     171.9°  -29.6°  151.9° -119.4°  -65.7° -113.2°  -93.2°   71.8°   17.9° -158.7°   77.7°   46.0°  -63.4° -121.8°  -81.8°  151.4°  -26.0°  152.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1esua_ :    (GLU28)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1ck3a_ :    (HIS26)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1li9a_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1axba_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1jwva_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1yt4a_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d3cmza_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1jwpa_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d4fd8a_ :    (PRO29)  (ILE287)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Klebsiella pneumoniae, SHV-1 [TaxId: 573]
 d1eroa_ :    (HIS26)  (TRP288)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1pzpa_ :    (PRO27)  (LYS288)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1lhya_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1htza_ :    (HIS26)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Klebsiella pneumoniae, TEM52 [TaxId: 573]
 d1fqga_ :    (PRO27)  (TRP288)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1rcja_ :    (PRO29)  (HIS289)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Klebsiella pneumoniae, SHV-1 [TaxId: 573]
 d2v1za_ :     (PRO1)  (HIS267)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
 d2b5ra1 :    (HIS26)  (TRP288)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d1jvja_ :    (PRO27)  (TRP290)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d2v20a_ :     (PRO1)  (HIS267)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
 d1xxma_ :    (THR29)  (TRP288)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TEM-1 [TaxId: 562]
 d2qpnb_ :    (SER19)  (SER284)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Klebsiella pneumoniae

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.3