Protein Concepts Dictionary

Tableau information

Concept source:  d2v29a_  amino acid (a.a.) range (ASP39)(LEU274)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEEHEHHHEHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP39)   (TYR45) H1
	   (ARG54)   (GLN60) E2
	   (ASN67)   (ILE71) E3
	   (ILE71)   (GLY76) E4
	   (PHE78)   (ASP85) H5
	   (ASN89)   (ASP96) E6
	  (ALA100)  (TRP106) E7
	  (LEU118)  (THR132) H8
	  (ARG137)  (HIS143) E9
	  (THR145)  (LEU154) H10
	  (ASP157)  (GLY168) H11
	  (GLU171)  (PHE176) H12
	  (VAL180)  (PRO184) E13
	  (THR190)  (MET201) H14
	  (SER205)  (PRO210) E15
	  (VAL214)  (GLY218) E16
	  (THR220)  (GLY245) H17
	  (SER252)  (GLY264) H18
	  (LEU268)  (LEU274) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
E2      164.2°   E2                                                                                                                            
E3       73.8°  106.8°   E3                                                                                                                     
E4      -77.2°   89.3°  -61.4°   E4                                                                                                              
H5       48.2° -144.4°  -98.1°  125.4°   H5                                                                                                       
E6     -114.6°  -65.4°  171.5°  120.4°  -87.4°   E6                                                                                                
E7       42.6°  147.1°  -45.7°  -89.9°   52.5°  139.8°   E7                                                                                         
H8      131.3°  -63.6°  112.9°  150.2°  -83.6°  -61.0°  106.2°   H8                                                                                  
E9       85.8°   86.0°  -37.3°   28.5° -127.9°  140.9°  -77.9°  130.0°   E9                                                                           
H10    -142.4°   22.9°  -95.9°  -66.5°  165.2°   78.1° -141.6°   86.2°  -66.9°   H10                                                                   
H11      74.1° -119.1°   51.1°  111.2°  -60.0° -128.4°   33.2°  -75.5°   88.2°  127.4°   H11                                                            
H12     -81.5°  -93.3° -152.0° -100.6°   74.2°   36.1°  119.1°   93.3° -129.1°  -95.6°  133.6°   H12                                                     
E13     -85.5°   78.8°  -92.2°  -30.8°  125.9°   89.8° -114.3°  139.1°  -57.4°  -58.4°  141.4°   72.5°   E13                                              
H14     122.9°  -72.8°   97.9°  147.9°  -79.0°  -76.6°   91.3°  -16.2°  121.4°   94.0°  -59.6° -106.6°  151.5°   H14                                       
E15     -84.2°   83.2°  -57.2°    9.2°  132.2°  123.0°  -91.2°  141.7°  -21.5°  -60.8°  108.2° -107.8°  -35.9°  138.8°   E15                                
E16      88.6° -103.4°  123.3° -163.2°  -41.0°  -57.8°   85.4°  -46.0°  160.6°  125.3°  -72.4°   68.1°  140.6°  -48.5°  172.2°   E16                         
H17    -114.3°   60.8°  -48.0°  -52.0° -145.1°  125.4°  -93.6°  101.2°  -30.0°   48.0°   87.5° -138.9°  -71.4°   96.0°  -42.8°  144.3°   H17                  
H18      67.2° -121.3°  124.3° -137.8°   26.6°  -60.9°   79.0°  -71.0°  152.6° -138.8°   80.4°  -53.7° -121.5°  -73.6°  146.9°  -25.4°  166.8°   H18           
H19     114.9°   66.6°  -41.1°   70.2° -128.1°  130.5°  -82.2°  -87.0°   43.5°   61.9°  -68.2°  157.5°   92.7°  -78.2°   61.4° -124.8°   21.4° -145.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gt7a_ :    (ALA43)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d2uyva_ :    (ASP38)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d2uyua_ :    (HIS46)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d2v2ba_ :    (ASP38)  (ALA273)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
 d2v9ia_ :    (ASP38)  (ALA273)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d2v9oe_ :    (ASP38)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
 d2v9gb_ :    (TYR45)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
 d2v9ea_ :    (HIS46)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
 d2v2aa_ :    (ASP38)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
 d1ojra_ :    (HIS46)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d2v9ma_ :    (HIS46)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
 d2v29a_ :    (ASP39)  (LEU274)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.74