Tableau information
Concept source: d1fkna_ amino acid (a.a.) range (GLN163)(ASP378)
nSSEs in this Concept: 19
String of secondary struct.elems. (SSEs) defining this concept: HEEEEHHHEHEEEEHEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN163) (ALA168) H1
(ALA168) (GLY177) E2
(GLY178) (SER182) E3
(SER187) (PRO192) E4
(VAL204) (ILE208) E5
(ASP216) (TYR222) H6
(LYS238) (SER252) H7
(ASP259) (GLY264) H8
(GLU265) (GLN271) E9
(PRO276) (PRO281) H10
(VAL282) (MET288) E11
(ASN293) (LEU301) E12
(TYR305) (GLU310) E13
(ASP318) (ILE324) E14
(GLY334) (GLU339) H15
(TYR342) (ASP346) E16
(ARG351) (VAL356) E17
(ALA368) (PRO373) E18
(PHE374) (ASP378) E19
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -49.6° E2
E3 97.8° -136.7° E3
E4 -108.0° -60.7° 150.8° E4
E5 121.3° 161.8° 26.2° -130.7° E5
H6 -99.5° -111.5° 100.2° -89.0° 84.6° H6
H7 94.7° 134.0° -3.1° 153.2° -29.2° -101.2° H7
H8 -35.9° -39.1° 129.9° -79.0° 145.6° -78.2° 127.1° H8
E9 78.3° 123.2° 21.0° 171.3° 43.3° -96.0° 18.3° -109.0° E9
H10 -84.4° -37.3° -133.5° 40.1° -138.8° 125.4° 133.0° -74.2° 137.4° H10
E11 -54.9° -12.3° -148.1° 53.2° 174.0° -100.5° 145.2° -34.6° -132.2° -39.7° E11
E12 123.8° 165.7° 51.1° -119.0° -29.9° 54.9° -53.4° 127.0° -59.4° 151.9° 155.4° E12
E13 116.1° -143.3° 71.3° -107.7° -52.7° 32.0° -73.0° 107.1° -73.9° 147.7° -132.4° 22.9° E13
E14 -82.1° -32.9° -142.5° 35.1° -146.6° 116.9° 141.8° -67.3° 144.1° -9.1° 32.7° -152.6° 142.1° E14
H15 43.5° 88.1° -54.3° -148.8° 78.8° -105.9° 51.3° -77.6° 35.6° -112.7° -96.6° 91.7° 98.7° -115.4° H15
E16 -65.4° -24.2° -160.6° -42.7° -173.0° -92.4° 157.7° -38.8° 143.6° 40.0° 12.5° -145.9° -123.8° 31.4° 108.1° E16
E17 102.8° 145.8° 10.1° 148.8° 18.8° 90.7° -12.3° 131.3° 24.6° -142.0° -156.3° 41.1° 61.2° -151.1° 60.0° 168.1° E17
E18 -57.8° 26.4° -116.7° 68.9° 137.1° -137.8° 114.7° -62.9° 111.1° -30.7° -37.5° 167.0° -169.6° -33.8° -82.2° 46.9° -126.8° E18
E19 -107.4° -59.1° 148.6° 4.9° 130.8° -93.9° 150.7° -80.3° 167.7° 35.8° -52.5° 121.9° -111.9° 31.5° -146.4° -42.9° 148.2° -65.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2zhra_ : (ASN162) (ASP378) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d2qk5a_ : (GLN224) (ASP439) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d3kmxa_ : (GLN224) (PRO434) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d2qmda_ : (ASN223) (PRO434) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d1fkna_ : (GLN163) (ASP378) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
d1fknb_ : (ASN162) (ASP378) [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |beta-secretase (memapsin) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.50