Protein Concepts Dictionary

Tableau information

Concept source:  d1w8xg_  amino acid (a.a.) range (ASN17)(TYR236)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEHEEHEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN17)   (GLN34) H1
	   (GLN34)   (GLN40) E2
	   (VAL42)   (ASP48) E3
	   (PHE55)   (ALA60) E4
	   (GLY63)   (GLY67) E5
	   (LEU69)   (HIS80) E6
	   (THR82)   (LEU87) E7
	   (GLY91)   (GLN97) H8
	   (GLN97)  (ASP103) E9
	  (ASN106)  (THR110) E10
	  (TRP115)  (GLY126) H11
	  (VAL147)  (THR153) E12
	  (ALA158)  (LEU170) E13
	  (GLY179)  (ASN184) E14
	  (GLN190)  (PHE196) E15
	  (ALA202)  (VAL206) E16
	  (ILE214)  (GLY217) E17
	  (GLY217)  (ASP222) H18
	  (ASP222)  (TYR236) E19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                                   
E2      -66.3°   E2                                                                                                                            
E3      -81.5°  -18.6°   E3                                                                                                                     
E4       86.2°  149.0°  167.2°   E4                                                                                                              
E5      -94.8°  -54.0°  -38.1°  147.7°   E5                                                                                                       
E6      -74.8°  -18.8°   -9.3°  160.7°  -35.2°   E6                                                                                                
E7     -123.6°  169.8°  153.8°  -38.9°  123.6°  157.4°   E7                                                                                         
H8      103.7°   90.4°   97.4°  -82.2° -128.3°  105.0°   84.5°   H8                                                                                  
E9      104.3°  139.6°  149.6°  -32.4° -160.1°  156.8°  -39.8°   52.2°   E9                                                                           
E10     -83.6°  -79.7°  -69.6°  112.5°  -36.2°  -63.0°  103.3° -164.2°  140.1°   E10                                                                   
H11     -87.8° -140.1° -136.4°   45.8° -102.0° -128.6°  -48.2°  126.2°   74.0°   67.2°   H11                                                            
E12      87.9°   31.2°   13.5°  169.5°  -24.7°   14.1° -143.4°  107.6°  158.0°  -58.2° -125.4°   E12                                                     
E13     130.3°  153.0°  145.8°  -45.2°  130.7°  154.0°   18.9°  -66.2°  -29.7°  119.6°   66.7° -141.8°   E13                                              
E14      59.3°   91.0°  108.6°  -61.5°  144.0°  109.4°  -92.4°   49.2°   54.5° -142.2° -101.5°  122.0°  -83.9°   E14                                       
E15     -76.4°  -36.5°  -26.0°  151.6°   20.8°  -18.9°  143.3°  123.3°  175.5°  -44.1° -110.4°   17.9°  151.3° -123.6°   E15                                
E16    -102.5°  -59.8°  -42.7° -145.2°   -7.8°  -41.3°  116.8°  126.6°  152.3°  -37.6° -100.3°  -29.2°  122.9°  150.7°   28.4°   E16                         
E17     -67.2°  -31.3°  -26.2°  147.3°   30.4°  -17.2°  150.9° -121.2°  168.9°  -48.4° -111.7°   23.2°  161.0° -114.4°   -9.7°  -38.1°   E17                  
H18      73.9°   74.1°   88.3°   85.1° -126.3°   92.5° -104.9°  -30.2°   65.6°  150.6°  129.0°  101.5°  -89.6°   28.7° -110.7° -129.7°  104.2°   H18           
E19     101.7°  161.2°  174.9°  -15.5°  144.4°  175.7°  -24.5°  -78.1°  -25.9°  114.5°   48.2° -167.6°  -30.0°  -70.2°  158.5°  138.9°  158.8°  -88.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hb5a_ :    (ARG16)  (TYR236)   [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
 d1w8xh_ :    (ASN17)  (TYR236)   [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
 d1w8xg_ :    (ASN17)  (TYR236)   [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
 d1w8xa_ :    (ALA13)  (TYR236)   [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |PRD1 capsid assembly |Bacteriophage PRD1 [TaxId: 10658]
 d1gw7a_ :  (ARG1016) (TYR1236)   [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]
 d1gw8a_ :  (LEU1016) (TYR1236)   [view usage] : i.6.1.1 |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |Viruses and virus-receptor complexes |p3 shell |Bacteriophage PRD1 [TaxId: 10658]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   i.6