Protein Concepts Dictionary

Tableau information

Concept source:  d2nv2x_  amino acid (a.a.) range (LEU2)(ALA194)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHEHEEEEEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU2)    (LEU7) E1
	   (ARG14)   (GLY24) H2
	   (ALA25)   (VAL29) E3
	   (ARG32)   (GLU38) H4
	   (GLY41)   (PRO45) E5
	   (GLU48)   (TYR59) H6
	   (GLU63)   (GLN71) H7
	   (LYS73)   (CYS79) E8
	   (CYS79)   (LEU85) H9
	  (VAL102)  (ARG106) E10
	  (ALA118)  (GLY124) E11
	  (PHE129)  (ARG135) E12
	  (ARG135)  (GLU141) E13
	  (ASN145)  (LEU149) E14
	  (LEU149)  (ASN153) E15
	  (VAL157)  (GLY162) E16
	  (GLN163)  (SER168) E17
	  (ASN170)  (GLU175) H18
	  (ARG178)  (ALA194) H19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                   
H2      174.1°   H2                                                                                                                            
E3      -24.5° -161.2°   E3                                                                                                                     
H4     -159.9°   14.3°  172.3°   H4                                                                                                              
E5      -36.4°  140.3°  -55.6°  131.7°   E5                                                                                                       
H6       98.1°  -86.8°   75.2°  -97.9°  129.9°   H6                                                                                                
H7     -156.5°   18.3°  165.2°   -8.1° -135.5°   94.6°   H7                                                                                         
E8      -46.4°  129.6°  -67.3°  119.9°  -12.1°  142.0° -123.4°   E8                                                                                  
H9       84.5°  -96.1°   77.3°  -95.8°  117.4°  -52.2°  -87.9° -121.7°   H9                                                                           
E10     -43.6°  136.9°  -50.5°  136.9°   25.3° -113.4°  144.2°   34.1° -126.6°   E10                                                                   
E11     138.6°  -43.6°  122.5°  -49.8°  171.6°  -51.1°  -44.7°  164.4°   55.4° -161.4°   E11                                                            
E12      20.4° -164.4°    7.6° -168.5°   54.9°   77.7° -160.3°  -65.9°  -73.0°  -53.8°  122.0°   E12                                                     
E13     110.7°  -66.9°  114.0°  -60.6°  126.8°  -79.4°  -52.5° -121.3°   40.4°  150.7°   45.1° -107.9°   E13                                              
E14     -95.3°   83.3° -105.4°   81.9°  -60.6°  135.0°   89.4°  -54.8° -172.6°   55.1°  125.8° -108.9° -134.0°   E14                                       
E15     -43.0°  131.9°  -66.6°  119.7°   19.2° -141.1° -121.1°   13.1° -109.9°   44.4°  153.8°  -63.5° -109.0°  -65.8°   E15                                
E16     125.0°  -58.7°  105.1°  -67.5°  160.7°   31.9°  -63.2°  171.1°   50.3° -144.1°  -19.2°  105.9°   56.5°  133.6° -160.2°   E16                         
E17     -46.7°  129.7°  -66.5°  120.9°  -10.9° -140.4°  124.8°   -3.6° -124.2°   30.8°  167.5°  -65.7° -124.9°  -52.7°   16.6°  171.6°   E17                  
H18    -118.2°   62.2° -119.8°   65.8°  -86.4°  113.0°   73.9°  -81.7°  156.1°   74.8° -100.8°  125.7° -126.2°   27.1°   92.9° -106.5°   79.4°   H18           
H19     115.8°  -67.5°   97.6°  -74.8°  152.1°  -29.0°   69.6°  160.9°   40.4° -142.0°   25.0°  -97.5°   52.7°  143.9° -150.2°   10.4° -162.2° -116.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2nv2x_ :     (LEU2)  (ALA194)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
 d2nv2d_ :     (MET1)  (ALA194)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
 d1r9ga_ :     (MSE1)  (GLN192)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Hypothetical protein YaaE |Bacillus subtilis [TaxId: 1423]
 d2nv2j_ :     (LEU2)  (VAL196)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
 d2nv2b_ :     (MET1)  (GLN192)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23