Protein Concepts Dictionary

Tableau information

Concept source:  d3s13a_  amino acid (a.a.) range (ILE80)(ILE297)

nSSEs in this Concept: 19

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEEEHEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE80)   (GLU83) E1
	   (TYR86)   (LYS90) E2
	   (PRO99)  (ASP104) E3
	  (TYR105)  (SER113) H4
	  (ASN116)  (GLN122) E5
	  (GLU131)  (SER136) H6
	  (ASN150)  (LYS156) E7
	  (SER159)  (ASN169) E8
	  (GLU174)  (PRO185) E9
	  (ASP187)  (GLN196) H10
	  (PRO198)  (VAL204) E11
	  (ASN210)  (THR219) E12
	  (SER227)  (ILE236) E13
	  (ALA242)  (SER247) E14
	  (ASN250)  (GLY264) E15
	  (GLY264)  (LYS269) E16
	  (LYS280)  (PRO284) E17
	  (GLY286)  (SER290) E18
	  (PRO293)  (ILE297) E19

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                                   
E2      137.4°   E2                                                                                                                            
E3      -30.5° -147.3°   E3                                                                                                                     
H4      -40.3° -141.9°   57.6°   H4                                                                                                              
E5     -144.6°   77.8°  119.5°  118.3°   E5                                                                                                       
H6       83.7°  -54.1° -104.9° -100.2° -131.8°   H6                                                                                                
E7     -151.0°  -58.5°  121.1°  148.9°   31.5°  109.3°   E7                                                                                         
E8      -14.7° -150.5°  -29.9°   29.7°  131.4°  -96.5°  147.9°   E8                                                                                  
E9      149.8°  -20.5°  141.7° -159.8°  -62.1°   71.7°  -38.5° -164.3°   E9                                                                           
H10     -82.9°  136.2°  -75.3°   53.4°   66.1°  149.5°   95.5°   68.2°  127.0°   H10                                                                   
E11     -19.1° -151.6°  -34.5°   24.2°  128.9°  -98.2°  149.2°    5.6° -168.7°   64.3°   E11                                                            
E12     134.1°   12.7°  153.9° -129.7°  -80.9°   51.4°  -67.2°  144.4°  -31.3°  130.4°  143.6°   E12                                                     
E13     -32.6° -168.3°  -22.1°   39.9°  111.9° -116.3°  126.8°  -21.5°  160.3°  -55.5°  -22.6°  166.0°   E13                                              
E14     157.0°   22.7°  147.7° -154.7°  -56.3°   76.3°  -36.3°  171.7°    7.7° -120.1° -174.3°  -31.0°  162.5°   E14                                       
E15     -17.0° -135.4°  -44.8°   26.5°  142.7°  -82.6°  165.0°   17.1°  154.3°   76.6°  -16.3°  127.7°  -38.3°  158.1°   E15                                
E16     125.4°  -14.1° -143.4°  129.2°  -90.0°  -41.9°  -72.6° -137.4°  -34.5°  140.3° -137.8°   10.5° -158.1°   36.5°  121.6°   E16                         
E17    -138.9°   18.9° -134.4°  160.3°   72.1°   63.4°  -45.9° -153.4°   10.9°  137.6° -157.9°   31.6° -155.8°   18.4° -145.1°   31.1°   E17                  
E18       7.3°  139.2°   35.0°  -33.3° -142.6°   85.2°  156.1°  -11.3°  154.6°  -78.3°  -14.0°  133.9°  -32.2°  161.0°  -10.3°  126.2°  144.0°   E18           
E19     162.3°  -25.3° -158.6°  143.4°  -53.1°  -78.7°  -40.6°  171.2°  -18.9°  112.5°  167.0°  -28.5°  165.0°  -11.6°  154.4°  -36.9°  -28.6°  162.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2fk0a1 :    (PRO82)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4kdqa_ :    (LEU72)  (ILE295)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4cqpa_ :    (ILE71)  (ILE294)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/vietnam/1194/2004(h5n1)) [TaxId: 644788]
 d3zp6e_ :    (ILE75)  (ILE298)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza A virus [TaxId: 11320]
 d3gbma_ :    (ILE80)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza a virus (a/viet nam/1203/2004(h5n1)) [TaxId: 284218]
 d4jull_ :    (ILE80)  (PRO284)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2fk0c_ :    (PRO82)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/viet nam/1203/2004(h5n1)) [TaxId: 284218]
 d4cqsa_ :    (ILE71)  (ILE294)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/vietnam/1194/2004(h5n1)) [TaxId: 644788]
 d3s13a_ :    (ILE80)  (ILE297)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d2ibxa1 :    (ILE75)  (ILE298)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4bh2a_ :    (PRO74)  (ILE294)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza virus [TaxId: 284218]
 d3zpae_ :    (ILE75)  (ILE298)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/vietnam/1194/2004(h5n1)) [TaxId: 644788]
 d4n5za_ :    (ILE80)  (SER290)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |Hemagglutinin |Influenza A virus, different strains [TaxId: 11320]
 d4cr0a_ :    (ILE71)  (SER287)   [view usage] : b.19.1.2 |Viral protein domain |Viral protein domain |Influenza hemagglutinin headpiece |automated matches |Influenza a virus (a/vietnam/1194/2004(h5n1)) [TaxId: 644788]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.19