Tableau information
Concept source: d3tioa_ amino acid (a.a.) range (ARG18)(GLY144)
nSSEs in this Concept: 19
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG18) (ASP22) E1
(SER25) (GLY29) E2
(ASP30) (ALA34) E3
(ASP36) (TRP40) E4
(LEU42) (GLY47) E5
(TYR51) (GLY55) E6
(ARG57) (GLN61) E7
(GLY63) (VAL68) E8
(GLY78) (GLY84) E9
(ASP86) (GLY90) E10
(VAL93) (GLY97) E11
(CYS98) (ASN102) E12
(ARG103) (GLY107) E13
(GLY109) (LEU113) E14
(ALA116) (ASP120) E15
(ASP121) (GLY125) E16
(GLY127) (PRO131) E17
(ASN133) (GLU137) E18
(TYR140) (GLY144) E19
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -113.1° E2
E3 127.2° -118.3° E3
E4 5.8° 118.8° 121.4° E4
E5 -118.1° -7.9° 111.9° 123.6° E5
E6 121.8° -123.4° -5.4° 116.0° -116.8° E6
E7 6.3° 118.6° -121.1° -1.9° 123.2° 115.7° E7
E8 -113.1° -8.5° 115.9° -118.6° 5.4° 120.6° 118.0° E8
E9 119.5° -127.0° -9.9° 113.7° -121.0° -7.3° 113.7° -125.3° E9
E10 8.7° 120.5° -118.8° 3.8° 124.9° -113.4° 2.5° 119.7° 111.5° E10
E11 -111.4° 3.2° 119.3° -117.1° 7.5° 124.3° -116.8° 6.1° 128.3° 118.6° E11
E12 137.6° -109.2° 14.7° 132.0° -104.0° 19.4° 132.1° -108.8° 18.8° 130.0° -110.9° E12
E13 11.3° 122.6° -116.3° 6.3° 126.7° -110.9° 5.1° 121.5° -109.2° 2.6° 120.6° 127.7° E13
E14 -106.8° 13.0° 120.7° -112.1° 12.3° 125.1° -111.5° 6.9° 130.3° -113.1° 9.9° 114.7° 114.8° E14
E15 139.2° -107.7° 16.0° 133.5° -102.5° 20.8° 133.6° -107.3° 20.4° 131.6° -109.3° 1.6° 129.3° -113.2° E15
E16 12.9° 125.1° -114.4° 7.2° 129.5° -109.0° 6.7° 124.2° -107.0° 4.6° 123.2° -125.4° 2.9° 117.6° -127.0° E16
E17 -105.5° 17.1° 120.2° -110.7° 15.3° 124.3° -109.9° 10.1° 130.0° -111.4° 13.9° 115.2° -112.9° 4.1° 113.9° 115.8° E17
E18 126.9° -115.9° 8.3° 121.2° -108.8° 9.5° 120.6° -112.3° 16.6° 118.2° -116.4° -20.9° 115.6° -116.3° -21.8° 114.0° 115.3° E18
E19 -7.5° 106.6° -134.3° -13.1° 112.0° -129.0° -13.8° 107.3° -126.3° -16.3° 105.1° -144.0° -18.9° 101.2° -145.5° -20.3° 100.3° 134.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4m98a_ : (LYS284) (GLY397) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 242231]
d3tioa_ : (ARG18) (GLY144) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3eg4a_ : (PHE110) (GLY232) [view usage] : b.81.1.2 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD |automated matches |Brucella suis [TaxId: 29461]
d3bsya_ : (GLY72) (GLY189) [view usage] : b.81.1.8 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |PglD-like |Acetyltransferase PglD |Campylobacter jejuni [TaxId: 197]
d1v3wa_ : (GLY8) (GLY135) [view usage] : b.81.1.5 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |gamma-carbonic anhydrase-like |Ferripyochelin binding protein |Pyrococcus horikoshii [TaxId: 53953]
d3tiof_ : (ARG18) (GLY144) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4eqya_ : (ASN32) (GLY163) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d3d98a2 : (THR284) (ALA391) [view usage] : b.81.1.4 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |GlmU C-terminal domain-like |N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain |Mycobacterium tuberculosis [TaxId: 1773]
d3tiod_ : (ARG18) (GLY144) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1xhda_ : (ALA16) (GLY134) [view usage] : b.81.1.5 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |gamma-carbonic anhydrase-like |Putative acetyltransferase/acyltransferase BC4754 |Bacillus cereus [TaxId: 1396]
d1m8na_ : (THR3) (ARG102) [view usage] : b.81.2.1 |Single-stranded left-handed beta-helix |An insect antifreeze protein |An insect antifreeze protein |Thermal hysteresis protein |Spruce budworm (Choristoneura fumiferana), 7-turn isoforms [TaxId: 7141]
d4m99a_ : (PHE283) (GLY397) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 242231]
d1m8nb_ : (THR3) (ARG102) [view usage] : b.81.2.1 |Single-stranded left-handed beta-helix |An insect antifreeze protein |An insect antifreeze protein |Thermal hysteresis protein |Spruce budworm (Choristoneura fumiferana), 7-turn isoforms [TaxId: 7141]
d3hsqa_ : (SER25) (HIS155) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Leptospira interrogans [TaxId: 173]
d4e6tc_ : (HIS46) (LYS178) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1z2fa_ : (SER9) (ALA108) [view usage] : b.81.2.1 |Single-stranded left-handed beta-helix |An insect antifreeze protein |An insect antifreeze protein |automated matches |Choristoneura fumiferana [TaxId: 7141]
d2qkxa2 : (THR272) (ASP380) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Mycobacterium tuberculosis
d4n27a_ : (SER18) (GLY137) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Brucella abortus [TaxId: 359391]
d3r3ra_ : (ARG18) (GLY144) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d4eqyc_ : (HIS44) (VAL175) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d2f9ca1 : (ASN174) (ALA297) [view usage] : b.81.1.7 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |YdcK-like |Hypothetical protein YdcK |Salmonella enterica [TaxId: 28901]
d4mfga_ : (SER15) (GLY132) [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3vnpa_ : (ALA16) (GLY134) [view usage] : b.81.1.5 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |gamma-carbonic anhydrase-like |automated matches |Geobacillus kaustophilus [TaxId: 1462]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.81