Protein Concepts Dictionary

Tableau information

Concept source:  d4duaa_  amino acid (a.a.) range (GLU93)(GLU373)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HHHEHHHHHHHHHHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU93)  (SER108) H1
	  (MET112)  (HIS116) H2
	  (HIS116)  (LEU133) H3
	  (ASP136)  (PRO142) E4
	  (PRO142)  (ASN159) H5
	  (HIS171)  (ARG190) H6
	  (TYR198)  (GLY227) H7
	  (LEU233)  (ASN239) H8
	  (ASP251)  (HIS266) H9
	  (GLU267)  (ASN283) H10
	  (PRO284)  (ARG296) H11
	  (ARG296)  (PRO301) H12
	  (SER304)  (GLN310) H13
	  (LYS312)  (LEU324) H14
	  (PRO329)  (ALA335) E15
	  (ASP351)  (ILE357) E16
	  (ILE357)  (ASP363) H17
	  (GLY368)  (GLU373) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
H2       56.5°   H2                                                                                                                     
H3      -72.1°  -41.1°   H3                                                                                                              
E4     -134.7°  161.0°  147.2°   E4                                                                                                       
H5       98.7°  111.1°  151.4°  -56.4°   H5                                                                                                
H6     -130.2° -131.6°  -91.5°   57.4°  113.8°   H6                                                                                         
H7       57.9°   87.9°  124.1°  -88.7°  -40.8° -139.3°   H7                                                                                  
H8      127.3°  139.7° -159.5°   23.6°  -34.2°   80.0°  -71.6°   H8                                                                           
H9      -61.1°  -69.7°  -39.1° -128.0°  156.2°  -76.5°  117.3°  150.6°   H9                                                                    
H10     -47.3°  -69.6°  -48.7° -129.4°  140.9°  -86.4°  102.1°  147.3°  -15.5°   H10                                                            
H11      65.3°  -81.8° -121.7°   90.3°   35.7°  146.6°   14.8°   69.6° -126.4° -112.1°   H11                                                     
H12      87.7°  -53.2°  -88.1°  108.4°   64.1° -139.8°   67.8°   86.6° -122.8° -121.5°  -53.5°   H12                                              
H13     -98.8°  113.2°   73.6°  -82.3° -135.0°  -32.0° -133.7° -105.9°   46.6°   54.6°  148.4° -157.4°   H13                                       
H14     150.4°  112.6°   83.0°  -65.2° -110.7°  -32.8° -151.2°  -79.8°   89.6°  104.0° -144.0° -107.6°  -58.0°   H14                                
E15    -136.4°  159.3°  146.5°   -1.9°  -56.3°   57.5°  -89.5°   23.0° -129.0° -130.9°   90.6°  107.1°  -83.1°  -64.1°   E15                         
E16      19.3°  -43.1°  -52.9°  152.1°  115.1° -124.0°   75.2°  146.2°  -48.2°  -37.8°   79.9°  -86.7°   92.4° -133.6°  154.0°   E16                  
H17     -53.3° -103.3°  -90.2°   94.5°  106.1°  -81.1°   79.8°  106.6°  -52.6°  -41.6°   94.4°  139.1°  -56.0° -112.7°   96.4°  -60.7°   H17           
H18      83.3°   29.0°   54.3° -132.9°   98.4° -124.9°   94.2° -116.3°   91.8°   95.9°  -82.3°  -34.3°  124.6°  -95.1° -131.0°   72.0°  132.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3kx5a_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d4duba_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d3wspa_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d3cbda_ :    (SER72)  (LYS391)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |automated matches |Bacillus megaterium [TaxId: 1404]
 d3bena_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d4duaa_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d2x80a_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d4dtwa_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d1zo4a_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d2j1ma_ :    (GLU93)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
 d1bvya_ :   (LEU103)  (GLU373)   [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.104