Protein Concepts Dictionary

Tableau information

Concept source:  d3hu1a3  amino acid (a.a.) range (GLY202)(SER457)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHHEHEHEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY202)  (GLY207) H1
	  (ARG210)  (PRO227) H2
	  (ALA228)  (GLY234) H3
	  (GLY234)  (PRO246) E4
	  (LYS251)  (ASN260) H5
	  (PHE265)  (ASN270) E6
	  (ASN270)  (SER276) H7
	  (GLY280)  (ASN296) H8
	  (PRO298)  (ASP304) E9
	  (GLY318)  (GLY334) H10
	  (HIS340)  (ALA346) E11
	  (ARG359)  (ASP364) H12
	  (ASP364)  (GLY370) E13
	  (ASP373)  (HIS384) H14
	  (LEU396)  (GLU402) H15
	  (GLY408)  (MET427) H16
	  (ALA439)  (LEU445) H17
	  (MET449)  (SER457) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
H2      156.3°   H2                                                                                                                     
H3      -78.0°  -81.0°   H3                                                                                                              
E4       47.0° -146.5°  123.0°   E4                                                                                                       
H5     -161.5°  -34.9°  -99.5° -137.3°   H5                                                                                                
E6       41.5°  131.7°   96.0°  -34.6° -155.6°   E6                                                                                         
H7      105.2°   66.8°  -97.8°  -85.6°  -93.3°   65.9°   H7                                                                                  
H8     -120.4°  -66.5°  -81.1°  134.4°   41.7° -161.3°  132.8°   H8                                                                           
E9       35.8°  142.5°  101.9°  -24.1° -157.1°  -12.1°  -75.9°  151.0°   E9                                                                    
H10    -121.7°   59.2°  -69.4°  146.5°   42.5° -161.6°  125.7°  -13.5° -156.8°   H10                                                            
E11      30.5° -158.1°  106.9°  -16.6° -152.2°  -29.2°  -91.6°  134.2°  -17.2° -142.6°   E11                                                     
H12      95.5° -108.2°  150.6°   63.5°   77.5°  -97.7°  111.5°   77.6°  -87.7°   90.9°  -75.2°   H12                                              
E13      55.8° -147.9°  126.8°  -35.0°  115.9°  -67.4° -117.1°   99.4°  -55.5°  111.6°  -39.3°   39.8°   E13                                       
H14    -127.5°   72.5° -153.5°  -80.9°   58.8° -100.5°  -70.9°   89.3°  -98.4°   97.2°  -97.5°   46.3°  -78.9°   H14                                
H15     -59.7°   98.3°  -51.8°   83.3° -132.6°   49.2°   61.1° -132.7°   59.2° -120.3°   72.9°  146.8°  111.3°  130.3°   H15                         
H16      82.6° -119.6°  158.7°  -41.9°   96.1°  -74.6°  -95.6°  101.5°  -65.7°  114.9°  -56.2°   23.9°   31.9°  -47.5°  123.7°   H16                  
H17      70.2°  -94.0°   22.7°  117.0° -100.4°  101.2°  120.2°  -69.4°  102.5°  -61.0°  100.6° -128.2°  108.1° -158.3°  -67.4°  139.1°   H17           
H18     -66.0°   93.3°  -57.2°   83.6°  128.2°   49.0°   52.6° -136.6°   60.1° -123.4°   75.2°  145.6° -114.5°  122.1°   -8.6°  121.7°  -74.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ko8b3 :   (GLY202)  (GLN458)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hu3a3 :   (GLY202)  (GLN458)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1e32a2 :   (GLY202)  (LEU445)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Membrane fusion ATPase VCP/p97 |Mouse (Mus musculus) [TaxId: 10090]
 d3hu1a3 :   (GLY202)  (SER457)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4klna3 :   (CYS209)  (SER459)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3hu2a3 :   (GLY202)  (SER444)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37