Protein Concepts Dictionary

Tableau information

Concept source:  d3a7da_  amino acid (a.a.) range (LYS5)(GLY214)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HHHEEHEHEHHEHEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS5)   (GLN15) H1
	   (PRO22)   (THR34) H2
	   (GLY43)   (TYR57) H3
	   (SER60)   (LEU65) E4
	   (LEU65)   (CYS69) E5
	   (GLY70)   (LEU80) H6
	   (ALA84)   (GLU90) E7
	   (ASN92)  (GLY107) H8
	  (LYS111)  (ASN116) E9
	  (ALA118)  (LEU126) H10
	  (LEU126)  (ASP131) H11
	  (ASP136)  (ASP141) E12
	  (TYR147)  (GLY158) H13
	  (THR164)  (ASN170) E14
	  (ASN170)  (GLY175) H15
	  (PRO177)  (SER186) H16
	  (GLU190)  (SER195) E17
	  (VAL203)  (GLY214) E18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
H2      130.0°   H2                                                                                                                     
H3      -71.7°  151.2°   H3                                                                                                              
E4      142.2°   24.2°  145.5°   E4                                                                                                       
E5      -64.2°   76.9° -131.5°  -78.8°   E5                                                                                                
H6      -41.8° -154.0°  -31.6°  175.2° -105.7°   H6                                                                                         
E7     -145.7°   32.3°  139.3°   -8.2°  -81.5°  170.8°   E7                                                                                  
H8        7.8°  130.6°  -68.0°  146.6°   70.3°  -36.9°  151.4°   H8                                                                           
E9     -159.8°   46.8°  120.4°  -25.8°  -97.8°  152.0°  -18.9° -167.4°   E9                                                                    
H10     -65.5° -160.5°   -9.5° -149.7°  122.6°  -28.6°  142.3°  -62.8°  123.9°   H10                                                            
H11     -34.2°  141.3°  -67.5°  133.0°   64.8°  -51.7°  129.8°  -40.2°  131.3°  -58.2°   H11                                                     
E12     117.1°   23.3°  171.1°  -25.6°   56.1°  157.2°  -32.0°  120.9°  -50.8°  171.3°  118.6°   E12                                              
H13     -75.7°  153.9°  -16.5°  137.1°  125.8°  -41.7°  129.4°  -74.1°  111.3°  -13.3°  -61.6°  158.7°   H13                                       
E14     107.9°   26.6°  175.5°  -35.8°   50.3°  146.6°  -42.5°  111.1°  -61.3°  172.8°  114.8°  -10.7°  167.9°   E14                                
H15     143.9°   24.0° -144.0°    1.9°   80.6° -173.3°   -8.3°  148.0°  -24.9° -148.6°  134.7°   27.1° -136.2°   37.1°   H15                         
H16     -73.8° -130.4°   27.2°  140.7° -137.4°  -34.5°  140.1°  -67.2°  124.8°  -34.8°  -84.8° -152.8°   43.5° -148.4° -138.8°   H16                  
E17      79.1°  -53.7°  150.5°  -64.0°   27.5°  119.1°  -69.8°   82.6°  -88.7°  144.3°   90.3°  -38.4°  151.7°  -28.9°  -65.5° -138.2°   E17           
E18     -89.9°  138.0°  -19.8°  126.1° -142.1°  -51.3°  119.6°  -87.0°  100.7°  -24.5°  -78.2°  151.5°  -16.7°  161.8°  124.8°   39.2°  168.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3a7da_ :     (LYS5)  (GLY214)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4p7ka_ :    (THR47)  (TYR255)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4p7ja_ :    (THR47)  (ILE254)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3a7ea_ :     (THR4)  (GLY214)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Human (Homo sapiens) [TaxId: 9606]
 d4pyoa_ :    (THR47)  (TYR255)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1jr4a_ :     (THR4)  (GLY214)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4pyob_ :    (THR47)  (GLY257)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4p7ga_ :    (THR47)  (ILE254)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1vida_ :     (THR4)  (GLY214)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3nwea_ :     (THR4)  (GLY214)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3hvha_ :    (THR47)  (GLY257)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3bwma_ :     (THR4)  (GLY214)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Human (Homo sapiens) [TaxId: 9606]
 d2cl5b_ :     (LYS5)  (GLY214)   [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66