Protein Concepts Dictionary

Tableau information

Concept source:  d4r7uc_  amino acid (a.a.) range (TYR85)(ALA270)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEEEHEHEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR85)   (MET91) H1
	   (MET91)  (GLY106) H2
	  (GLY106)  (SER111) E3
	  (ASP124)  (GLY134) H4
	  (GLY134)  (GLU140) E5
	  (VAL144)  (ASP149) E6
	  (ARG151)  (HIS156) E7
	  (HIS156)  (LYS161) E8
	  (SER163)  (THR175) H9
	  (GLY179)  (ASN185) E10
	  (PRO190)  (GLY203) H11
	  (ALA204)  (GLY208) E12
	  (ASP212)  (GLU217) E13
	  (GLU220)  (LYS226) E14
	  (LYS226)  (PRO231) E15
	  (ARG233)  (ARG247) H16
	  (GLY248)  (ASN254) E17
	  (GLU261)  (ALA270) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
H2      127.7°   H2                                                                                                                     
E3      -68.7°  161.6°   E3                                                                                                              
H4      122.1°   -5.8° -165.3°   H4                                                                                                       
E5      -98.9°  132.6°  -30.2° -137.8°   E5                                                                                                
E6      116.9°  -11.8° -173.4°    8.2°  144.0°   E6                                                                                         
E7      -26.8° -113.2°   77.8°  107.5° -105.2°  105.7°   E7                                                                                  
E8      -60.4°  169.8°    8.5°  171.8°   38.5°  177.0°  -71.3°   E8                                                                           
H9      131.7°  -20.6°  155.2°  -24.2°  126.9°  -22.5° -126.9°  160.5°   H9                                                                    
E10     -38.0°  155.8°  -33.8°  150.6°  -63.0°  149.8°   44.2°  -27.1° -169.7°   E10                                                            
H11     134.2°  -29.9°  146.6°  -33.8°  120.4°  -31.8° -134.4°  151.0°   -9.6° -169.3°   H11                                                     
E12     -29.3°  120.8°  -68.4°  115.4°  -94.9°  114.5°   10.6°  -62.5°  136.4°  -35.5° -144.4°   E12                                              
E13     146.1°  -30.5°  139.9°  -35.7°  111.1°  -36.6° -142.2°  146.4°   15.8°  173.5°   12.0°  150.9°   E13                                       
E14      60.3° -131.2°   61.5°  131.4°  -75.8° -123.8°   87.0°  -56.8°  112.5°  -65.2°  105.0°  -86.7°  111.4°   E14                                
E15      40.0°  149.3°  -37.2°  144.7°  -64.7°  145.3°   40.8°  -31.7°  167.6°    7.6°  174.1°   31.2° -173.6°  -72.8°   E15                         
H16      35.3°  162.3°  -35.7°  157.0°  -65.1°  150.6°   54.0°  -27.3°  154.4°  -21.1°  148.7°  -48.7°  155.5°   44.3°  -28.5°   H16                  
E17    -137.6°  -13.4°  153.6°  -18.9°  123.4°  -21.3° -126.3°  161.6°  -11.5° -169.0°   18.8° -134.2°   17.0°  123.6° -162.0° -165.8°   E17           
H18      33.3°  161.0°  -36.2°  155.4°  -66.1°  149.9°   50.5°  -27.8° -156.9°  -17.5° -152.0°  -44.9°  159.4°  -48.0°   24.8°   -4.0° -167.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4r7uc_ :    (TYR85)  (ALA270)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]
 d3sg1a_ :    (MET92)  (ARG262)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d1a2na_ :    (TYR84)  (GLY270)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Escherichia coli [TaxId: 562]
 d3vcya_ :    (TYR85)  (ALA270)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Vibrio fischeri [TaxId: 388396]
 d1uaea_ :    (TYR84)  (ALA269)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |UDP-N-acetylglucosamine enolpyruvyl transferase (EPT, MurA, MurZ) |Escherichia coli [TaxId: 562]
 d2rl1a_ :    (TYR86)  (GLY272)   [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |automated matches |Haemophilus influenzae [TaxId: 727]
 d4r7ua_ :    (TYR85)  (GLU261)   [view usage] : d.68.2.0 |IF3-like |EPT/RTPC-like |automated matches |automated matches |Vibrio cholerae [TaxId: 243277]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.68