Protein Concepts Dictionary

Tableau information

Concept source:  d3hjjb_  amino acid (a.a.) range (GLU19)(LYS166)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HHEEEEEEEEEHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU19)   (GLY42) H1
	   (ASP43)   (LEU53) H2
	   (GLY55)   (ASP59) E3
	   (ALA62)   (PRO66) E4
	   (ASP67)   (ASP71) E5
	   (ASN75)   (LYS80) E6
	   (LYS80)   (PHE86) E7
	   (ASN87)   (VAL93) E8
	   (CYS94)   (GLY99) E9
	  (HIS101)  (ALA105) E10
	  (VAL108)  (HIS118) E11
	  (HIS118)  (SER124) H12
	  (GLY125)  (GLY135) E13
	  (ASN137)  (GLY141) E14
	  (GLY143)  (ASN147) E15
	  (GLY149)  (GLY153) E16
	  (ASN155)  (ALA159) E17
	  (GLY161)  (LYS166) E18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
H2     -158.2°   H2                                                                                                                     
E3       32.3° -130.8°   E3                                                                                                              
E4      -84.4°  107.8° -116.5°   E4                                                                                                       
E5      164.3°   17.5°  132.0°  111.4°   E5                                                                                                
E6       32.7° -127.9°    8.1°  114.8°  132.2°   E6                                                                                         
E7      -82.9°  107.0° -114.4°    7.0°  112.7°  111.7°   E7                                                                                  
E8      158.6°   23.6°  127.1° -116.4°   -7.2°  128.4°  118.4°   E8                                                                           
E9       38.1° -122.7°   10.2°  119.8° -126.9°    5.4°  116.4° -123.2°   E9                                                                    
E10     -84.9°  103.9° -115.9°  -10.1°  110.5° -112.8°   -3.9°  116.4°  117.3°   E10                                                            
E11    -155.7°   33.6°  161.3°  -74.8°   38.5°  154.9°  -74.9°   45.1°  151.2°   72.3°   E11                                                     
H12     -78.3°  115.4°  -76.5° -101.3°   98.1°  -84.6° -107.5°   91.8°  -85.7° -111.2°  117.4°   H12                                              
E13      45.7° -115.1°   16.8°  126.2° -119.4°   13.0°  122.2° -116.0°    7.7°  122.7°  144.5°  -88.6°   E13                                       
E14     -86.0°  102.6° -116.9°  -11.1°  109.3° -113.5°   -5.2°  115.3° -118.0°   -1.4°   71.1° -112.3°  123.3°   E14                                
E15     157.4°  -16.3°  125.1° -117.8°   -7.5°  125.0° -118.6°   -8.9°  119.6° -116.1°  -43.7°   99.8°  112.1°  114.9°   E15                         
E16      41.1° -119.3°   13.8°  121.5° -124.2°    8.5°  117.7° -120.8°    3.7°  118.4°  147.6°  -88.5°   -4.8°  119.0°  116.8°   E16                  
E17     -84.5°  103.6° -115.2°   12.1°  110.8° -111.7°   -5.5°  116.8° -116.1°    2.1°   72.5° -113.0° -121.4°    1.9°  116.2°  117.1°   E17           
E18     142.1°  -25.7°  109.9° -132.5°  -22.6°  109.6° -132.4°  -20.4°  104.3° -129.5°  -57.7°   98.8°   96.8° -128.2°  -15.3°  101.6°  129.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hjjb_ :    (GLU19)  (LYS166)   [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d1ocxa_ :    (ASP18)  (LYS164)   [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |Maltose O-acetyltransferase |Escherichia coli [TaxId: 562]
 d3hjjc_ :    (ASP18)  (LYS166)   [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d2p2oa_ :    (LEU39)  (LYS165)   [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |automated matches |Geobacillus kaustophilus [TaxId: 235909]
 d4isxb_ :    (GLU18)  (THR163)   [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
 d3srtb_ :    (GLU18)  (THR163)   [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
 d3srta_ :    (ASP17)  (THR163)   [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
 d2p2od_ :    (LEU19)  (LYS165)   [view usage] : b.81.1.3 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |Galactoside acetyltransferase-like |automated matches |Geobacillus kaustophilus [TaxId: 235909]
 d3igja_ :    (ASP18)  (LYS166)   [view usage] : b.81.1.0 |Single-stranded left-handed beta-helix |Trimeric LpxA-like enzymes |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.81