Tableau information
Concept source: d1v6ya_ amino acid (a.a.) range (SER28)(TRP275)
nSSEs in this Concept: 18
String of secondary struct.elems. (SSEs) defining this concept: HEHHEHHEHHEHEHEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER28) (PHE38) H1
(ASN39) (ALA43) E2
(ALA43) (LYS48) H3
(SER62) (GLY75) H4
(GLN77) (THR82) E5
(PRO90) (LEU96) H6
(SER99) (TYR116) H7
(ALA121) (VAL126) E8
(SER141) (THR146) H9
(ASP149) (ALA161) H10
(LEU167) (TYR172) E11
(TRP179) (ARG195) H12
(ASP200) (SER206) E13
(ASP216) (ASP226) H14
(VAL229) (ILE233) E15
(LEU236) (ARG241) E16
(ALA246) (VAL266) H17
(GLY271) (TRP275) E18
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 127.9° E2
H3 -90.2° -42.7° H3
H4 -56.6° 175.3° -140.1° H4
E5 110.9° -23.5° -45.0° 160.3° E5
H6 65.7° -68.2° 56.0° -116.4° -46.4° H6
H7 -78.4° 142.7° 127.5° -33.5° 166.1° -144.1° H7
E8 109.6° -43.3° -68.7° 138.8° -24.9° -46.3° 162.8° E8
H9 -47.8° 82.2° 42.4° -101.8° 72.8° 45.1° -109.3° -86.6° H9
H10 -78.9° 120.5° 98.1° -57.4° 139.6° 134.2° -29.6° 163.8° 89.6° H10
E11 123.1° -76.8° -115.6° 102.0° -71.0° -87.3° 113.3° -49.5° -132.4° 137.8° E11
H12 -51.4° 101.3° 60.2° -80.6° 103.8° 84.0° -73.5° 123.5° 39.0° -50.6° 171.2° H12
E13 133.0° -82.8° -125.2° 94.7° -83.9° -106.6° 97.3° -66.0° -151.5° 118.9° -19.4° 169.4° E13
H14 -62.6° 81.0° 39.4° -101.2° 83.2° 71.8° -92.6° 104.6° 29.1° -66.3° 154.0° -20.9° 163.0° H14
E15 143.2° -85.7° -126.3° 90.4° -95.5° -128.1° 81.3° -83.7° -167.8° 97.7° -42.1° 146.7° -23.1° 149.0° E15
E16 133.4° -69.1° -110.1° 109.1° -67.0° -91.0° 114.7° -48.7° -134.9° 134.8° -10.5° 170.3° -17.4° 149.5° -37.1° E16
H17 -35.3° 103.7° 61.1° -79.5° 98.0° 67.5° -83.8° 111.7° 25.6° -66.8° 151.7° -20.0° 167.9° -27.4° -164.4° 158.3° H17
E18 166.5° -43.9° -85.2° 132.0° -57.5° -101.4° 114.4° -56.9° 126.1° 114.3° -49.3° 134.3° -44.4° 118.7° -41.8° -38.7° 145.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1nq6a_ : (ALA27) (TRP268) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Streptomyces halstedii [TaxId: 1944]
d2d1za1 : (SER28) (TRP266) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Streptomyces olivaceoviridis [TaxId: 1921]
d1v6ya_ : (SER28) (TRP275) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Streptomyces olivaceoviridis [TaxId: 1921]
d1v0ma_ : (THR31) (TRP266) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Streptomyces lividans [TaxId: 1916]
d1od8a_ : (THR31) (TRP266) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Streptomyces lividans [TaxId: 1916]
d3u7bb_ : (GLN27) (TRP285) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fungus (Fusarium oxysporum) [TaxId: 5507]
d1xyza_ : (PRO543) (TRP795) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase |Clostridium thermocellum, XynZ [TaxId: 1515]
d2hisa_ : (ALA27) (TRP273) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Cellulomonas fimi [TaxId: 1708]
d1expa_ : (ALA27) (TRP273) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Cellulomonas fimi [TaxId: 1708]
d1isva2 : (SER28) (TRP266) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Streptomyces olivaceoviridis [TaxId: 1921]
d3nj3a_ : (ASP46) (PHE296) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Thermotoga petrophila [TaxId: 390874]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1