Protein Concepts Dictionary

Tableau information

Concept source:  d1kvqa_  amino acid (a.a.) range (THR104)(PRO333)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HEHHEEEHEEHEEHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR104)  (ALA114) H1
	  (ASN118)  (ALA124) E2
	  (ALA124)  (GLY129) H3
	  (SER147)  (ALA166) H4
	  (SER171)  (TYR177) E5
	  (PRO180)  (SER186) E6
	  (GLY190)  (GLN194) E7
	  (MET201)  (GLY210) H8
	  (ASP213)  (GLY219) E9
	  (THR228)  (VAL236) E10
	  (VAL236)  (ALA251) H11
	  (GLY255)  (ASN260) E12
	  (GLY264)  (SER268) E13
	  (SER268)  (ALA279) H14
	  (LYS282)  (PHE288) E15
	  (PRO297)  (ALA303) E16
	  (ALA303)  (ASN311) H17
	  (THR317)  (PRO333) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
E2     -170.7°   E2                                                                                                                     
H3     -111.5°   66.7°   H3                                                                                                              
H4      -20.2° -155.3°  -91.4°   H4                                                                                                       
E5      156.4°  -20.1°  -85.7° -161.4°   E5                                                                                                
E6       63.0° -117.3°  170.5°   82.7°   97.5°   E6                                                                                         
E7      127.1°  -61.5°  -68.2°  122.3°  -73.4° -121.3°   E7                                                                                  
H8      119.6°  -62.2° -128.7°  139.4°   44.3°  -56.7°  -84.0°   H8                                                                           
E9      -86.7°   89.4°   27.3°  -66.6° -105.7° -144.0°   91.9° -149.6°   E9                                                                    
E10      31.0° -151.8°  141.5°   51.1° -132.6°  -35.2°  120.6°  -89.7°  117.7°   E10                                                            
H11     -31.4°  148.5°   81.7°   15.2°  165.9°  -93.9°  107.5° -149.2°   60.3°   59.7°   H11                                                     
E12     146.7°  -28.7°  -91.8° -153.7°   -9.8°   90.3°  -82.9°   41.0° -108.7°  125.5°  164.3°   E12                                              
E13     161.2°  -25.7°  -85.4° -172.7°   24.8°  101.3°  -50.4°   45.0° -111.4°  130.5° -157.6°   33.3°   E13                                       
H14      79.6° -101.2° -167.1°   99.4°  -81.8°   16.7° -110.9°  -40.0°  157.1°   50.8°  110.2°   75.5°   84.6°   H14                                
E15    -115.0°  -67.7°  -25.3°  -97.6°  -87.5°  163.0°   44.8°  121.2°  -47.2°  136.0°  -83.9°  -96.3°  -76.8°  155.6°   E15                         
E16      15.0° -156.5°  115.1°   27.3° -142.6°  -57.5°  142.0° -113.2°   88.2°   33.1°   41.8° -132.7°  158.2°   73.9°  124.9°   E16                  
H17      19.5° -157.3°  129.5°   38.7° -138.0°  -44.0°  135.3° -100.7°  103.1°   18.0°   50.9° -128.8°  145.0°   60.7°  134.3°  -15.5°   H17           
H18      97.8°  -90.2° -126.6°  112.9°  -83.2°   62.7°  -58.6°  -51.6°  146.0°   71.7°  109.6°  -85.7°  -64.5°  -55.1°  102.0°  104.6°   89.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kvta_ :   (THR104)  (PRO333)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
 d1udca_ :    (TYR97)  (PRO333)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
 d1kvqa_ :   (THR104)  (PRO333)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
 d1kvua_ :   (THR104)  (PRO333)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
 d1kvra_ :    (PRO93)  (PRO333)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
 d1a9ya_ :    (TYR97)  (PRO333)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]
 d1a9za_ :    (PRO93)  (PRO333)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2