Protein Concepts Dictionary

Tableau information

Concept source:  d4bkpc_  amino acid (a.a.) range (LEU18)(PHE271)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHEEHEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU18)   (GLY30) H1
	   (GLY35)   (VAL41) E2
	   (ASP50)   (VAL61) H3
	   (THR64)   (LEU69) E4
	   (VAL73)   (ARG78) H5
	   (TYR82)  (GLY105) H6
	  (ARG107)  (CYS112) E7
	  (ASP127)  (ASN133) H8
	  (ASN140)  (GLY162) H9
	  (PHE165)  (THR171) E10
	  (THR171)  (GLY175) E11
	  (LEU188)  (SER200) H12
	  (ALA204)  (TRP208) E13
	  (ASN212)  (SER220) E14
	  (SER220)  (ARG232) H15
	  (GLU238)  (SER243) E16
	  (SER251)  (ASP264) H17
	  (GLY267)  (PHE271) E18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
E2     -152.4°   E2                                                                                                                     
H3        4.4°  156.7°   H3                                                                                                              
E4      133.0°  -37.8°  134.4°   E4                                                                                                       
H5     -137.5°  -46.1° -136.9°  -18.7°   H5                                                                                                
H6      -33.0°  154.4°  -31.3° -165.6° -158.7°   H6                                                                                         
E7      128.0°  -43.0°  129.2°   -5.4°  -19.4°  160.2°   E7                                                                                  
H8     -155.2°   35.5° -156.1°   68.2°   67.0° -126.2°   73.5°   H8                                                                           
H9      -50.5°  149.0°  -47.6° -163.1° -144.9°  -20.4° -160.8° -114.0°   H9                                                                    
E10     105.9°  -62.5°  107.1°  -27.3°  -36.5°  138.3°  -22.1°   95.3° -147.4°   E10                                                            
E11      65.4°  -87.1°   69.7°  -87.6° -105.7°   86.3°  -86.2° -109.6°  106.4°   74.6°   E11                                                     
H12      92.3°  -62.2°   95.9°  -51.4°  -69.2°  120.5°  -49.8°   95.6°  140.9°   40.7°  -36.5°   H12                                              
E13    -110.3°   95.0° -106.8°  110.2°   94.7°  -80.4° -113.3°   62.4°  -60.5° -129.6°  153.3°  157.2°   E13                                       
E14     -38.0° -128.5°   40.2° -146.7° -164.8°   31.0° -145.4° -117.7°   48.7° -129.5°  -59.2°  -95.6°  100.2°   E14                                
H15     -72.0°  128.0°  -69.4°  150.8°  133.8°  -40.1°  153.1°  -92.5°   21.9°  159.3° -120.4° -156.8°   40.7°  -61.5°   H15                         
E16      85.3°  -75.9°   87.6°  -48.5°  -61.0°  118.3°  -44.3°  111.3°  134.5°  -24.7°   52.4°   26.1° -153.6°  104.8°  156.1°   E16                  
H17      53.2°  -99.2°   57.5°  -95.3° -112.2°   76.6°  -93.0° -121.6°   97.1°   78.0°  -12.4°  -44.2°  152.4°   52.6°  113.8°   53.8°   H17           
E18    -127.3°   79.8° -123.3°   90.2°   74.7°  -99.7°   93.2°   52.6°  -79.5° -110.3°  161.1°  139.5°  -20.1°  120.1°  -60.6° -134.9°  169.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4b8wa_ :    (VAL19)  (THR274)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bkpc_ :    (LEU18)  (PHE271)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4b8zb_ :    (VAL19)  (THR274)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4b8zc_ :    (VAL19)  (THR274)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4e5yd_ :    (GLY17)  (PHE271)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4bkpa_ :    (LEU18)  (THR273)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2