Protein Concepts Dictionary

Tableau information

Concept source:  d1yv9a1  amino acid (a.a.) range (ILE23)(ASP249)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHEHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE23)   (ASP37) H1
	   (PRO39)   (ASN45) E2
	   (SER50)   (ASP63) H3
	   (LEU70)   (ALA74) E4
	   (ALA74)   (ASN86) H5
	   (LYS90)   (ILE94) E6
	   (GLU96)  (ALA106) H7
	  (ASP116)  (LEU122) E8
	  (GLU129)  (GLY141) H9
	  (LEU143)  (ASN148) E10
	  (GLY162)  (THR174) H11
	  (THR176)  (GLY182) E12
	  (ALA186)  (GLY197) H13
	  (GLN202)  (ASP208) E14
	  (ASN209)  (ASN220) H15
	  (ASP223)  (SER229) E16
	  (PRO233)  (THR239) H17
	  (THR245)  (ASP249) E18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                            
E2     -141.6°   E2                                                                                                                     
H3     -109.9°  107.7°   H3                                                                                                              
E4      124.9°  -24.8°  123.8°   E4                                                                                                       
H5       59.3°  -84.6° -166.0°  -65.6°   H5                                                                                                
E6     -142.7°   75.6°  -34.1°   89.7°  152.7°   E6                                                                                         
H7       28.6° -113.1°  138.2°  -97.6°  -32.6°  170.8°   H7                                                                                  
E8     -125.7°   92.3°   15.9°  108.0°  168.6°  -18.4°  154.1°   E8                                                                           
H9       49.8° -103.5° -138.6°  -79.8°   27.9° -141.5°   36.1° -144.9°   H9                                                                    
E10     107.7° -110.4°   -6.2° -124.3°  160.5°  -35.3°  136.3°  -18.2° -132.7°   E10                                                            
H11      95.2°   49.7°  153.5°  -30.0°  -35.8°  119.5°  -67.6°  137.9°  -54.9° -152.8°   H11                                                     
E12     -64.3° -149.7°  -46.3° -169.9°  123.6°  -80.4°   92.1°  -62.2°  106.8°  -45.7°  159.4°   E12                                              
H13     -43.5°  156.3°  -69.7°  166.1°  101.9° -103.8°   69.4°  -85.4°   91.6°  -69.6°  136.7°  -24.0°   H13                                       
E14    -158.7°  -44.1°   65.9°  -67.1° -127.5°  -41.0° -147.7°   52.4° -146.8°   70.1°  -93.7°  105.8°  121.3°   E14                                
H15      35.1°  121.5° -124.4°   97.7°   41.6°  140.3°  -33.2° -135.1°   18.0° -119.2°   72.6°  -88.8°  -74.4° -164.3°   H15                         
E16     142.4°  -65.3°   47.7°  -88.4° -146.3°  -33.9°  151.2°  -37.2° -167.7°   52.8° -114.7°   84.5°  100.7°  -21.3° -172.0°   E16                  
H17     -74.0°   89.8° -126.7°   65.1°   44.5°  115.8°  -63.0°  124.7°  -27.1° -120.7°   51.4° -117.6° -110.9°  126.0°  -39.0°  142.6°   H17           
E18     126.2°  -81.2°   37.9° -104.9° -155.1°  -39.1°  142.1°  -33.3°  175.3°  -43.9° -129.7°   68.4°   84.0°  -37.8°  157.3°  -16.7° -154.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1yv9b_ :    (ILE23)  (ASP249)   [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |automated matches |Enterococcus faecalis [TaxId: 226185]
 d4kn8a_ :    (THR19)  (LYS247)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d1wvia_ :  (ILE1021) (SER1247)   [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |Putative phosphatase SMU.1415c |Streptococcus mutans [TaxId: 1309]
 d3qgmc_ :    (ILE23)  (ASN254)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
 d1ys9a1 :    (PRO22)  (SER247)   [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |Hypothetical protein SPy1043 |Streptococcus pyogenes [TaxId: 1314]
 d4o8ca_ :    (THR19)  (LYS247)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d4jdpb_ :    (PRO24)  (ASN254)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
 d1yv9a1 :    (ILE23)  (ASP249)   [view usage] : c.108.1.14 |HAD-like |HAD-like |NagD-like |Putative hydrolase EF1188 |Enterococcus faecalis [TaxId: 1351]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108