Tableau information
Concept source: d1ylja_ amino acid (a.a.) range (SER27)(GLN267)
nSSEs in this Concept: 18
String of secondary struct.elems. (SSEs) defining this concept: HEEHEHEHHHHHHHHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER27) (GLY41) H1
(GLY45) (THR51) E2
(ASN54) (TYR60) E3
(CYS69) (GLU85) H4
(GLN93) (LYS98) E5
(ASN106) (VAL113) H6
(ASN114) (THR118) E7
(THR118) (SER130) H8
(ASN132) (GLY143) H9
(GLY146) (GLY156) H10
(GLU166) (THR171) H11
(THR182) (LEU193) H12
(GLY200) (ASN214) H13
(ASN214) (SER220) H14
(SER220) (LEU225) H15
(TRP229) (GLY238) E16
(GLY242) (GLY255) E17
(ALA257) (GLN267) E18
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 150.7° E2
E3 -33.8° 165.0° E3
H4 122.6° 41.4° -152.8° H4
E5 -14.4° -162.5° 19.4° 135.9° E5
H6 -67.8° 87.6° -101.3° 56.1° -82.0° H6
E7 -169.9° 38.7° -136.1° -66.8° 155.5° 122.2° E7
H8 79.3° -117.6° 49.1° -157.8° 66.3° 143.5° 91.6° H8
H9 -117.6° 70.3° -123.0° 44.4° 121.0° 79.1° -65.7° -132.4° H9
H10 -165.3° 41.0° -132.0° 72.0° -151.3° 126.7° 6.2° -86.1° 71.6° H10
H11 -99.7° 106.7° -66.0° 133.0° -85.3° -164.7° 70.2° -32.4° 100.4° -66.4° H11
H12 117.0° -34.1° 147.7° 34.0° -130.6° 55.6° 72.7° -136.6° 78.1° 75.1° -139.5° H12
H13 49.7° -128.6° 37.6° 152.2° -42.6° 104.4° 124.2° -39.4° -160.5° -118.0° -71.1° -120.0° H13
H14 92.5° -108.3° 60.3° -144.7° 78.8° 158.5° -77.9° 15.0° -119.5° -72.8° -19.4° -134.7° -54.4° H14
H15 132.0° -54.3° 111.4° -95.6° -124.5° 130.4° 44.5° -63.6° 110.0° 38.8° 64.4° -78.0° -82.7° -57.0° H15
E16 -35.6° 157.4° -37.6° 116.8° 32.5° -79.7° -139.4° 82.7° -88.9° -140.9° -85.1° 134.9° 73.1° 89.3° 146.0° E16
E17 150.0° -16.4° 148.7° 57.6° -154.4° 99.1° 36.3° -102.0° 84.1° 35.8° 96.1° -43.5° -113.8° -94.0° -38.4° 173.0° E17
E18 -28.5° 176.7° -18.3° -135.3° 18.1° -89.9° -142.5° 65.6° -107.1° -140.8° -75.6° 144.1° 54.2° 74.8° 129.0° -19.4° 167.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4hbua_ : (ALA28) (LYS252) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d1g68a_ : (PHE26) (ALA266) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]
d1ylta_ : (SER27) (GLN267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d1ymxa_ : (SER27) (GLY255) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d1iyoa_ : (SER28) (GLN267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
d2zq9a_ : (SER28) (GLN267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
d1kgfa_ : (LEU33) (ASN266) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d1ylja_ : (SER27) (GLN267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d2zq7a_ : (SER28) (GLN267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
d3znya_ : (ASP28) (LYS254) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Klebsiella pneumoniae [TaxId: 573]
d1kgea_ : (GLU32) (ASN266) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d3hlwa_ : (SER27) (ALA248) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
d1pioa_ : (GLU32) (LYS253) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d1blca_ : (GLU32) (LYS253) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d2zq8a_ : (SER28) (GLN267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
d1g6aa_ : (GLN27) (ALA266) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Pseudomonas aeruginosa, PSE-4 carbenicillinase [TaxId: 287]
d1djaa_ : (MET30) (ASN266) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Staphylococcus aureus [TaxId: 1280]
d1ylpa_ : (SER27) (GLN267) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3