Tableau information
Concept source: d1uj1b_ amino acid (a.a.) range (GLU55)(GLY302)
nSSEs in this Concept: 18
String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEEEEHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU55) (LYS61) H1
(SER65) (ALA70) E2
(VAL73) (GLY79) E3
(GLY79) (ASN84) E4
(CYS85) (VAL91) E5
(LYS100) (PRO108) E6
(PHE112) (TYR118) E7
(SER123) (GLN127) E8
(HIS134) (GLY138) E9
(GLY146) (TYR154) E10
(ASP155) (TYR161) E11
(GLY170) (THR175) E12
(ASN203) (GLY215) H13
(THR226) (ASN238) H14
(GLN244) (GLY251) H15
(GLY251) (THR257) H16
(ALA260) (GLY275) H17
(THR292) (GLY302) H18
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -81.3° E2
E3 -110.1° 135.4° E3
E4 172.7° 91.4° 75.4° E4
E5 -12.6° -72.9° 109.2° 161.9° E5
E6 162.4° 105.6° -76.6° -21.4° 173.2° E6
E7 54.1° 110.7° -110.4° -129.4° 66.5° -108.5° E7
E8 -142.4° -78.8° 66.2° 34.7° -130.0° 55.1° 163.5° E8
E9 62.8° 61.1° -162.7° -113.2° 67.6° 105.8° -52.4° 129.6° E9
E10 -90.0° -40.4° 95.4° 84.6° -77.6° 105.8° 140.8° -54.7° 100.2° E10
E11 123.2° 143.0° -66.6° -63.0° 135.2° -43.2° -73.5° 90.8° -103.1° 145.5° E11
E12 -64.4° -98.5° 55.0° 117.5° -58.0° -128.7° 104.0° -87.4° 125.5° -66.9° -116.5° E12
H13 77.5° 8.0° 143.3° 95.2° 70.5° -107.2° -103.0° 85.7° -53.1° 48.0° -140.3° 102.8° H13
H14 75.4° 113.9° -110.6° -107.5° 87.6° -87.0° -22.0° 142.1° 53.2° 153.2° -57.0° -123.0° 106.1° H14
H15 53.9° -27.5° 136.0° -118.8° 45.6° -132.3° -92.2° -101.1° -54.5° 50.0° -157.2° 83.7° -25.1° 104.0° H15
H16 98.7° 21.3° 137.2° -74.1° 92.2° -85.4° -112.1° -71.6° 59.8° 52.4° -121.9° 117.3° 21.8° 106.8° -46.8° H16
H17 104.8° 107.1° -110.8° -76.9° 115.9° -57.8° 53.5° -111.4° 59.6° 142.4° -44.3° -150.6° 101.1° 31.8° 112.9° 90.7° H17
H18 60.8° -20.9° 142.1° -111.9° 53.5° -124.0° -93.6° -98.1° -50.6° 50.7° -150.9° 91.6° -17.0° 102.5° -8.7° 38.7° 107.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4mdsa_ : (GLU55) (SER301) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d1wofb_ : (GLU55) (GLY302) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
d3aw0a_ : (GLU55) (ARG298) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d3aw1a_ : (GLU55) (SER301) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d2q6ga_ : (TYR54) (GLY302) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d2qc2a_ : (GLU55) (GLY302) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d1uj1b_ : (GLU55) (GLY302) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d2qiqa_ : (ASN53) (SER301) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |SARS coronavirus [TaxId: 227859]
d3ea8a_ : (ASN53) (ARG298) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |automated matches |SARS coronavirus [TaxId: 227859]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.47