Protein Concepts Dictionary

Tableau information

Concept source:  d1vpxc_  amino acid (a.a.) range (HIS0)(LEU192)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEHEHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS0)    (LEU5) E1
	   (LEU10)   (GLY20) H2
	   (ASP23)   (PRO29) E3
	   (THR30)   (GLY36) H4
	   (GLU38)   (LEU49) H5
	   (VAL54)   (SER60) E6
	   (TYR63)   (GLN75) H7
	   (TYR79)   (PRO85) E8
	   (THR87)  (GLY101) H9
	  (LYS103)  (LEU108) E10
	  (PRO112)  (GLY122) H11
	  (THR124)  (PHE129) E12
	  (VAL130)  (LEU136) H13
	  (GLY140)  (TYR154) H14
	  (GLU157)  (ALA162) E15
	  (PRO168)  (GLY178) H16
	  (ASP180)  (PRO185) E17
	  (PHE186)  (LEU192) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                            
H2      157.4°   H2                                                                                                                     
E3      -32.4°  169.3°   E3                                                                                                              
H4       49.9° -108.9°  -81.6°   H4                                                                                                       
H5      141.3°  -16.2°  171.8°   93.6°   H5                                                                                                
E6      -58.3°  144.3°  -26.7° -105.0° -160.4°   E6                                                                                         
H7       98.2°  -62.1°  128.5°   48.5°  -48.8°  144.8°   H7                                                                                  
E8      -73.1°  122.1°  -48.4° -119.5°  130.8°  -43.1°  161.6°   E8                                                                           
H9      120.9°  -51.5°  134.6°   80.4°  -50.1°  126.4°  -40.1° -157.9°   H9                                                                    
E10     -67.2°  116.4°  -58.5°   99.9°  116.3°  -67.1°  131.6°  -30.1° -166.2°   E10                                                            
H11     106.7°  -75.6°  107.4°  -86.2°  -78.7°   96.2°  -63.6°  134.0°  -30.2°  163.1°   H11                                                     
E12     -59.5°  114.5°  -64.8°   79.9°  107.9°  -81.9°  109.9°  -51.7°  149.0°  -22.4°  164.9°   E12                                              
H13     -76.8°  108.8°  -64.9°  109.3°  111.0°  -68.9°  135.5°  -27.6° -160.3°   10.0°  160.6°   30.0°   H13                                       
H14     139.3°  -52.3°  124.6° -118.3°  -63.6°  101.3°  -79.4°  117.9°  -40.0°  141.8°  -35.9°  159.2°  132.2°   H14                                
E15     -49.5°  116.2°  -67.5°   58.6°  104.4°  -90.8°   91.5°  -70.4°  131.6°  -43.1°  144.7°  -21.4°  -51.4° -167.8°   E15                         
H16     156.3°  -43.6°  128.7° -137.9°  -59.0°  102.1°  -92.0°  102.4°  -57.6°  120.3°  -59.2°  136.0°  110.3°  -23.3°  152.0°   H16                  
E17     -19.2°  138.8°  -50.2°   37.0°  122.8°  -76.7°   84.8°  -82.5°  116.4°  -67.1°  112.6°  -52.3°  -77.1°  148.5°  -36.1° -171.7°   E17           
H18    -128.1°   32.9°  149.7°  -90.3°   22.8°  157.6°  -57.3°  115.0°  -71.5°   94.7° -101.0°   85.0°   90.9°  -84.9°   83.4°  -75.3°  109.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3s0cc_ :     (MET1)  (LEU195)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermoplasma acidophilum [TaxId: 273075]
 d1vpxe_ :     (MET1)  (LEU192)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermotoga maritima [TaxId: 2336]
 d3s1wa_ :     (MET1)  (LEU195)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermoplasma acidophilum [TaxId: 273075]
 d3s1ub_ :     (MET1)  (LEU195)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermoplasma acidophilum [TaxId: 273075]
 d1vpxs_ :     (HIS0)  (LEU192)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermotoga maritima [TaxId: 2336]
 d3s0cb_ :     (MET1)  (LEU195)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermoplasma acidophilum [TaxId: 273075]
 d1vpxc_ :     (HIS0)  (LEU192)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermotoga maritima [TaxId: 2336]
 d1vpxd_ :     (MET1)  (LEU192)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermotoga maritima [TaxId: 2336]
 d1vpxj_ :     (MET1)  (LEU192)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermotoga maritima [TaxId: 2336]
 d1vpxg_ :     (MET1)  (LEU192)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermotoga maritima [TaxId: 2336]
 d1wx0a1 :     (GLU2)  (LEU201)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermus thermophilus [TaxId: 274]
 d1vpxb_ :     (MET1)  (LEU192)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Decameric fructose-6-phosphate aldolase/transaldolase |Thermotoga maritima [TaxId: 2336]
 d3r8ra_ :     (LEU2)  (LEU193)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3s0ca_ :     (MET1)  (LEU195)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermoplasma acidophilum [TaxId: 273075]
 d3pb2c_ :     (GLY4)  (ALA213)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermotoga maritima [TaxId: 2336]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1