Protein Concepts Dictionary

Tableau information

Concept source:  d1iuna_  amino acid (a.a.) range (TYR55)(GLU272)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHHHHHHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR55)   (ASP61) E1
	   (SER77)   (GLU93) H2
	   (ALA97)  (ALA103) E3
	  (ALA103)  (ARG115) H4
	  (ASP121)  (GLY127) E5
	  (THR136)  (TYR145) H6
	  (SER148)  (PHE159) H7
	  (ASP162)  (THR167) H8
	  (THR167)  (GLN180) H9
	  (GLY182)  (MET190) H10
	  (ARG197)  (ALA203) H11
	  (SER205)  (LEU212) H12
	  (GLU215)  (GLY221) E13
	  (GLY221)  (PRO228) H14
	  (LEU229)  (LEU238) H15
	  (ALA242)  (GLY248) E16
	  (TRP253)  (GLN258) H17
	  (PHE262)  (GLU272) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                            
H2      135.9°   H2                                                                                                                     
E3      -44.5°  146.4°   E3                                                                                                              
H4      110.4°  -73.6° -139.9°   H4                                                                                                       
E5      -51.7°  136.3°  -10.6° -150.1°   E5                                                                                                
H6      -66.2°   69.8°   99.2°  -92.9°   98.6°   H6                                                                                         
H7      141.2°  -81.1°  114.3°   62.4°  114.0° -146.6°   H7                                                                                  
H8      -71.7°   64.3° -100.7°   96.5°  -98.7°   -8.0°  143.9°   H8                                                                           
H9      -62.7°   93.7° -105.8°   52.5° -114.2°  -55.0°  113.1°   62.3°   H9                                                                    
H10      87.1° -129.2°  -80.9°   64.8°  -88.5° -137.3°   54.6° -145.2°   83.6°   H10                                                            
H11     145.1°  -43.8° -163.3°   36.9° -161.6°   97.4°  -49.2°   95.9°   82.5°   85.8°   H11                                                     
H12     158.4°   24.0° -140.4°   75.9° -130.3°   93.3°  -60.4°   87.2°  112.1° -113.7°   39.3°   H12                                              
E13     -56.8°  122.6°  -23.8° -163.6°  -14.1°   90.6°  119.6°  -89.2° -118.6° -102.2°  157.8° -119.9°   E13                                       
H14      36.5°  114.9°   79.7°  -75.8°   87.9°  -56.1° -128.9°  -64.1°  -26.3°  -82.4°  108.6°  136.5°   93.1°   H14                                
H15     128.7°  -65.6°  146.5°   19.2° -153.2° -105.1°  -45.7°  106.5°   71.4°   65.6°  -22.6°  -61.2° -164.3°   94.9°   H15                         
E16     -70.7°  107.0°  -39.7° -177.8°  -29.3°   89.2° -115.5°   85.6° -129.3° -113.6°  142.6°  103.8°  -16.3°  105.7° -159.2°   E16                  
H17    -129.0°  -62.0°   92.9°  120.4°   82.8°  105.7°  -72.9°   97.8°  154.5° -117.0°  -84.2°  -47.6°   73.7°  158.2° -102.3°   58.7°   H17           
H18     120.4°  -63.2°  150.4°   11.2°  160.1°  -92.6°   58.7°  -94.7°   59.9°   72.2°   25.9°   64.8°  174.2°  -84.7°   13.0°  168.5° -110.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hkha_ :    (ARG52)  (LYS279)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Gamma-lactamase |Aureobacterium sp. [TaxId: 51671]
 d2wuda_ :    (SER79)  (GLY288)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2og1b_ :    (ARG65)  (ARG284)   [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Burkholderia xenovorans [TaxId: 36873]
 d2vf2a_ :    (SER79)  (GLY288)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2d0da_ :    (THR68)  (ASN271)   [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |Meta-cleavage product hydrolase CumD |Pseudomonas fluorescens [TaxId: 294]
 d3v1la_ :    (ARG65)  (ARG284)   [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Burkholderia xenovorans [TaxId: 36873]
 d1iuna_ :    (TYR55)  (GLU272)   [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |Meta-cleavage product hydrolase CumD |Pseudomonas fluorescens [TaxId: 294]
 d2wuea_ :    (SER79)  (GLY288)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1iuoa_ :    (THR68)  (GLU272)   [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |Meta-cleavage product hydrolase CumD |Pseudomonas fluorescens [TaxId: 294]
 d2pu7a_ :    (ARG65)  (ARG284)   [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Burkholderia xenovorans [TaxId: 36873]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69