Protein Concepts Dictionary

Tableau information

Concept source:  d7r1ra2  amino acid (a.a.) range (VAL226)(PRO445)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEHHHEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL226)  (ASP232) E1
	  (SER233)  (ARG251) H2
	  (GLY253)  (GLY259) E3
	  (ILE279)  (SER291) H4
	  (ALA301)  (PRO307) E5
	  (VAL313)  (LEU319) H6
	  (ASP334)  (ASN340) E7
	  (ASN340)  (GLY350) H8
	  (GLU351)  (SER357) E9
	  (LEU364)  (ALA370) H10
	  (GLN372)  (LEU378) H11
	  (TYR379)  (ASP385) H12
	  (ARG389)  (LYS394) E13
	  (LYS394)  (SER408) H14
	  (ILE412)  (ASN416) E15
	  (ASN416)  (SER424) H16
	  (ASP427)  (PRO432) H17
	  (GLN441)  (PRO445) E18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                            
H2     -162.4°   H2                                                                                                                     
E3      -22.4° -167.0°   E3                                                                                                              
H4      151.9°  -25.9°  166.3°   H4                                                                                                       
E5      -43.6°  150.1°  -21.4°  155.3°   E5                                                                                                
H6      147.4°  -15.2°  162.9°  -29.6° -160.6°   H6                                                                                         
E7      -68.1°  127.9°  -46.5°  130.4°  -25.6° -142.4°   E7                                                                                  
H8       75.7°  -98.5°   69.8° -123.8°   69.9°  -95.7°   80.2°   H8                                                                           
E9       80.5°  -94.8°   97.9°   71.8°  111.8°   87.6°  119.2° -140.4°   E9                                                                    
H10    -149.8°   44.7°  127.5°  -56.8°  106.5°  -59.3°   83.3°   90.8° -123.6°   H10                                                            
H11      27.1° -136.5°   41.9°  142.6°  -61.3° -122.9°  -86.8°  -58.1°   87.2° -148.6°   H11                                                     
H12      32.3° -130.5°   49.5°  134.2°  -69.4° -116.1°  -95.0°  -61.7°   81.4° -152.3°    8.5°   H12                                              
E13     122.7°   57.6° -109.5°  -82.5°  -97.3°  -63.3°  -87.9°  -48.6°  150.8°   43.8° -106.3° -108.6°   E13                                       
H14     141.6°  -24.8°  163.8°  -21.3° -174.7°   15.7° -149.6° -109.4°   72.2°  -68.2°  123.1°  115.1°   78.9°   H14                                
E15     -85.9°  111.7°  -68.3°  104.6°  -50.7°  126.5°  -28.6° -106.5°  102.8°   72.0° -110.1° -117.4°  -96.7° -125.7°   E15                         
H16    -116.5°   78.8° -106.2°   63.8°  -92.3°   90.7°  -70.9° -139.4°   79.7°  -58.7°  143.5°  146.3° -101.4°  -85.0°   42.4°   H16                  
H17     -86.5°   77.9° -108.5°   72.0° -129.9°   63.3° -154.2°  -97.8°  -49.1°  122.5°  -70.9°  -62.5°  110.2°   55.3° -151.8°  120.5°   H17           
E18     -52.3°  136.4°  -55.4°  111.0°  -60.9°  137.2°  -66.1°  125.1°   53.6° -124.4°   77.2°   78.8° -153.8°  121.8°  -58.7°  -67.6°   95.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d6r1ra2 :   (VAL226)  (PRO445)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d4r1ra2 :   (VAL226)  (ASN450)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d2r1ra2 :   (SER224)  (ASN450)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d7r1ra2 :   (VAL226)  (PRO445)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d5r1ra2 :   (VAL226)  (PRO445)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d1r1ra2 :   (VAL226)  (ASN450)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.7