Protein Concepts Dictionary

Tableau information

Concept source:  d2zpsa_  amino acid (a.a.) range (GLY3)(ALA220)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEEEEHEHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY3)    (ALA9) E1
	    (ALA9)   (GLN15) H2
	   (GLN15)   (SER20) E3
	   (CYS25)   (ASN31) E4
	   (TRP34)   (ALA38) E5
	   (VAL46)   (GLY51) E6
	   (SER61)   (SER66) E7
	   (SER68)   (HIS73) E8
	   (ASP84)   (LEU90) E9
	  (MET115)  (TRP121) E10
	  (ASP130)  (LEU134) H11
	  (LEU134)  (SER143) E12
	  (SER143)  (TYR151) H13
	  (ALA158)  (GLY163) E14
	  (GLY178)  (CYS182) E15
	  (VAL189)  (TYR194) E16
	  (PRO202)  (ALA206) E17
	  (ASN212)  (ALA220) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                            
H2      -91.7°   H2                                                                                                                     
E3      -96.1°  -65.1°   E3                                                                                                              
E4       42.1°  -79.6°  124.8°   E4                                                                                                       
E5     -168.2°   89.8°  -73.9°  149.4°   E5                                                                                                
E6       74.6° -147.2°  144.5°  -70.2°  109.7°   E6                                                                                         
E7       99.3°   23.2°  -42.8°   99.9°  -77.8°  170.0°   E7                                                                                  
E8      143.9°   72.8° -105.8°  102.1°  -47.3°  100.8°  -79.3°   E8                                                                           
E9      -17.9°  -99.1°   84.5°  -59.9°  150.7°  -76.9°   99.8°  161.7°   E9                                                                    
E10     -78.3°  -92.8°  -32.5°  118.9°  -89.9°  112.6°  -73.1° -133.4°   61.9°   E10                                                            
H11      61.1°  -50.6° -108.0°  -30.1°  127.5°  -97.4°   72.6°   84.6°  -77.8° -120.3°   H11                                                     
E12     123.3°   57.0°  107.8°  -83.4°   66.9° -105.8°   70.6°   22.2° -140.4°  140.2°  -62.7°   E12                                              
H13    -120.0°  -82.0°  -28.5° -153.3°   48.7°  130.6°  -59.2°  -90.7°  104.6°  -42.9° -131.6°  102.5°   H13                                       
E14     104.8° -163.5° -111.5°  113.1°  -74.0°   42.9° -147.0°  -93.6°   96.5°  -90.0°  139.2°  112.2°   89.1°   E14                                
E15      90.3°  102.2°  165.8°   54.7°  100.8°  -49.6°  123.7°   62.7° -104.5°  161.5°   64.3°  -58.3°  149.5°   78.7°   E15                         
E16    -158.8°  -97.8°  -71.1°  158.7°  -10.9°  105.6°  -83.0°  -57.4°  140.9°  -82.2°  138.3°   77.6°   43.7°  -66.5°  106.1°   E16                  
E17     -42.1°   49.7°   80.4°  -44.8°  138.6° -110.1°   61.4°  113.4°  -52.5°   85.1°  -35.4°  -91.7° -108.6°  146.8°  -96.3°  144.3°   E17           
H18     -34.0°   79.9°   62.3°  -71.2°  135.3° -101.5°   76.0°  152.6°  -24.7°   48.0°  -77.0° -133.4°   86.7° -113.6° -123.8°  129.6°   43.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2zpra_ :     (GLY3)  (THR221)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Chum salmon (Oncorhynchus keta) [TaxId: 8018]
 d2zpsa_ :     (GLY3)  (ALA220)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Chum salmon (Oncorhynchus keta) [TaxId: 8018]
 d1bzxe_ :    (GLY18)  (SER244)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Atlantic salmon (Salmo salar) [TaxId: 8030]
 d1bita_ :    (GLY18)  (SER244)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Trypsin(ogen) |Atlantic salmon (Salmo salar) [TaxId: 8030]
 d2zpqa_ :     (GLY3)  (ALA220)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Chum salmon (Oncorhynchus keta) [TaxId: 8018]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47