Tableau information
Concept source: d2wkya_ amino acid (a.a.) range (ARG4)(GLY209)
nSSEs in this Concept: 18
String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEHEEHEHHHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG4) (THR10) E1
(VAL17) (ASP23) E2
(LYS24) (GLY28) E3
(GLY34) (ILE46) H4
(LEU50) (LEU55) E5
(GLY72) (HIS80) H6
(ASP83) (ALA87) E7
(TYR93) (ILE99) H8
(MET106) (ILE110) E9
(ILE110) (ARG115) E10
(ALA123) (GLN129) H11
(LYS131) (VAL137) E12
(SER141) (LYS147) H13
(SER152) (SER163) H14
(SER173) (LEU181) H15
(ASP184) (GLU190) E16
(GLU190) (ASN201) H17
(ASN203) (GLY209) E18
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -97.1° E2
E3 -116.3° 146.3° E3
H4 158.1° -101.7° 47.0° H4
E5 -26.3° -95.1° -112.5° 157.4° E5
H6 158.2° 101.0° -45.5° -23.1° 138.3° H6
E7 -31.0° 80.4° 131.1° 143.1° -54.5° -166.2° E7
H8 161.2° 80.5° -66.5° -36.7° 135.0° 21.5° -159.5° H8
E9 23.6° 110.3° -99.8° -146.8° 16.3° -135.3° 54.6° 140.9° E9
E10 -48.3° 49.1° -164.5° 147.1° -54.7° 149.6° 36.0° 128.2° 65.8° E10
H11 49.0° 98.8° -99.7° -136.8° 23.2° -115.5° 77.6° 112.7° -30.5° 71.2° H11
E12 168.9° 83.9° -62.5° -28.5° 142.6° 17.1° 158.3° -8.3° -146.5° 132.8° -119.9° E12
H13 59.4° -155.4° -56.9° 102.7° 60.7° -100.7° -81.3° 119.1° -45.2° -107.7° -61.1° -117.6° H13
H14 82.3° 50.2° -126.5° -118.6° 62.5° -100.1° 91.4° -82.0° 78.0° 58.5° 53.5° -90.0° -114.1° H14
H15 23.8° -85.0° 127.7° 147.9° -48.0° -169.9° -7.3° -165.4° 47.3° -38.2° 71.2° -165.4° 75.4° 90.1° H15
E16 155.6° -105.0° 43.5° -3.5° 154.2° 22.2° -144.0° -37.8° -143.3° 150.6° -134.3° -29.9° 99.4° -119.8° -148.2° E16
H17 -65.4° 38.1° 164.6° 126.3° -76.0° 135.7° -42.7° 117.4° 85.8° 21.5° 92.4° 119.0° -123.3° 68.6° -48.0° 129.6° H17
E18 99.9° -161.6° 19.8° -60.3° 103.2° -64.2° -111.3° -85.6° 88.1° 146.2° -97.6° -80.8° 42.9° -139.3° 108.2° -57.0° -148.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xxxa_ : (SER432) (GLY757) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3c31a_ : (ARG4) (GLY209) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3gbaa_ : (ARG4) (VAL218) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2wkya_ : (ARG4) (GLY209) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4bdla_ : (ARG431) (VAL766) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1s7ya_ : (LEU6) (GLY210) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4mf3a_ : (ARG5) (GLY210) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4e0xa_ : (ARG4) (GLY209) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2xxxd_ : (ARG431) (VAL766) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94