Protein Concepts Dictionary

Tableau information

Concept source:  d2a27a_  amino acid (a.a.) range (LEU19)(HIS272)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: EEEHEEHHEEEEEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU19)   (GLN23) E1
	   (PHE24)   (LYS29) E2
	   (TYR39)   (LYS45) E3
	   (SER57)   (VAL71) H4
	   (VAL76)   (ARG86) E5
	   (VAL89)   (GLU94) E6
	  (LEU101)  (GLN107) H7
	  (SER112)  (LYS134) H8
	  (LYS134)  (ASP139) E9
	  (ILE145)  (ASP149) E10
	  (PRO153)  (LEU159) E11
	  (LEU164)  (ASP170) E12
	  (GLY171)  (ASN176) E13
	  (PRO186)  (TYR191) H14
	  (GLY195)  (GLY213) H15
	  (LYS222)  (VAL232) H16
	  (SER245)  (LEU256) H17
	  (THR265)  (HIS272) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                            
E2      175.9°   E2                                                                                                                     
E3      -19.7°  160.0°   E3                                                                                                              
H4      140.8°  -38.8°  160.0°   H4                                                                                                       
E5      -65.9°  112.6°  -47.8° -145.0°   E5                                                                                                
E6      141.5°  -40.4°  157.9°   20.9°  152.5°   E6                                                                                         
H7      124.5°  -59.4°  127.3°  -60.2°  132.4°  -39.3°   H7                                                                                  
H8      -60.6°  115.4°  -59.8°  112.0°  -54.1°  132.8°  172.2°   H8                                                                           
E9       90.6°  -92.7°   78.9° -116.3°   75.8°  -96.9°  -59.1°  128.5°   E9                                                                    
E10    -165.8°  -13.9°  146.3°  -52.7°  100.1°  -52.5°   62.8°  113.7°   83.5°   E10                                                            
E11     -34.0°  142.1°  -32.5°  135.2°  -47.9°  153.3° -158.3°  -27.8°  108.5°  137.0°   E11                                                     
E12      70.5°  107.3°  -87.4°   73.2° -112.6°   86.5°  114.3°  -60.4°  151.8° -119.4°  -67.2°   E12                                              
E13      90.3°  -92.6°   76.7° -120.0°   69.1° -101.6°  -64.9°  122.5°   -7.3°   82.2°  104.6° -156.3°   E13                                       
H14     -37.4°  140.5°  -22.1°  156.8°  -29.2°  177.2° -143.0°   44.8°  -85.8°  128.9°   23.9°   90.7°  -81.2°   H14                                
H15     121.2°  -62.8°  116.8°  -75.3°  113.3°  -55.4°  -19.1°  166.6°   41.5°  -61.0°  148.9° -132.9°  -46.6° -127.2°   H15                         
H16     -89.3°   89.4° -107.8°   52.3° -133.9°   64.1°   93.7°  -80.0°  146.0°  102.8°  -89.7°  -22.5° -153.2° -113.2°  112.8°   H16                  
H17     -40.0°  136.4°  -33.8°  138.1°  -39.6°  158.2° -160.9°   26.6° -104.9°  129.5°    8.8°   74.3° -100.1°  -19.1° -146.3°  -96.7°   H17           
H18     133.2°  -50.4°  139.7°  -46.4°  142.0°  -25.6°   13.8° -158.4°   72.1°  -56.9°  165.9° -105.3°  -77.5° -156.8°  -30.9°   83.4°  173.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2a27a_ :    (LEU19)  (HIS272)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1phka_ :    (LEU25)  (HIS284)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |gamma-subunit of glycogen phosphorylase kinase (Phk) |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2phka_ :    (LEU25)  (VAL269)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |gamma-subunit of glycogen phosphorylase kinase (Phk) |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d3dlsa_ :   (LYS998) (ASP1248)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wvwa_ :    (LEU19)  (GLN271)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ya9a_ :    (LEU19)  (ARG271)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2a27b_ :    (LEU19)  (ARG271)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ql6a_ :    (LEU25)  (VAL269)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |gamma-subunit of glycogen phosphorylase kinase (Phk) |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144