Protein Concepts Dictionary

Tableau information

Concept source:  d4c1fa_  amino acid (a.a.) range (LEU25)(LYS239)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEHEEEEEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU25)   (LYS29) E1
	   (GLY33)   (GLU42) E2
	   (GLY47)   (ASN59) E3
	   (ALA60)   (ASP66) E4
	   (THR70)   (GLY85) H5
	   (GLY85)   (SER94) E6
	  (GLU105)  (SER111) H7
	  (ILE112)  (SER117) E8
	  (SER117)  (GLY128) H9
	  (THR133)  (GLY138) E10
	  (VAL139)  (VAL144) E11
	  (ILE148)  (GLY154) E12
	  (ASP160)  (LEU166) E13
	  (LYS170)  (GLY175) E14
	  (GLY175)  (GLY182) H15
	  (ASN190)  (GLY206) H16
	  (LYS209)  (SER214) E17
	  (SER222)  (LYS239) H18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                            
E2      158.2°   E2                                                                                                                     
E3      -44.1°  157.3°   E3                                                                                                              
E4      124.8°  -36.2°  153.1°   E4                                                                                                       
H5      -38.9°  155.8°  -28.7°  162.0°   H5                                                                                                
E6      104.9°  -59.6°  128.4°  -25.1°  143.5°   E6                                                                                         
H7      -74.7°  127.0°  -30.7° -146.9°  -48.2° -134.8°   H7                                                                                  
E8       81.7°  -81.4°  111.4°  -45.3°  120.6°  -23.4° -130.0°   E8                                                                           
H9     -171.3°   23.5° -136.2°   59.3° -135.4°   81.0° -105.8°  103.8°   H9                                                                    
E10      53.3° -108.6°   87.9°  -72.5°   92.2°  -51.8°  114.2°  -28.4° -131.8°   E10                                                            
E11     -77.0°  117.7°  -55.1°  151.5°  -38.8° -176.4°   48.5° -158.0°  -96.7°  129.9°   E11                                                     
E12     113.1°  -50.8°  136.6°   16.6°  151.9°   -8.8° -138.6°  -31.4°   72.6°  -59.7°  168.0°   E12                                              
E13     -39.3° -145.2°   46.2° -147.5°   18.0°  140.0°   65.1°  117.2° -132.7°   89.6°  -40.8°  145.7°   E13                                       
E14     168.1°   15.9° -141.9°  -44.2° -152.7°  -63.2° -112.5°  -86.4°   19.2° -114.9°  114.9°  -55.1°  151.8°   E14                                
H15      93.9°  -65.9°  136.4°  -52.2°  113.7°  -62.6°  160.8°  -61.2°   83.3°  -67.8° -114.5°   60.0°  -96.2°  -81.6°   H15                         
H16     -29.2° -157.4°   36.9° -148.8°   13.3°  133.6°   60.8°  110.2° -143.6°   81.8°  -48.1°  141.1°  -12.3° -162.7° -101.9°   H16                  
E17    -175.0°   26.4° -131.1°  -58.6°  138.4°  -77.1°  100.6° -100.5°   11.5° -128.9°  101.2°  -69.3°  140.3°  -14.4°  -91.1°  149.2°   E17           
H18    -133.9°   34.2° -142.0°   19.3° -169.5°  -29.3° -127.7°  -52.6°   52.8°  -81.0°  149.0°  -22.1° -166.5°   34.2°   71.3° -162.8°   47.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1vgnb_ :     (LEU7)  (LYS221)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Serratia marcescens [TaxId: 615]
 d1jjea_ :     (LEU7)  (LYS222)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas aeruginosa, IMP-1 [TaxId: 287]
 d2whga_ :    (GLU43)  (LYS260)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4c1fa_ :    (LEU25)  (LYS239)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Serratia marcescens [TaxId: 615]
 d1wupc_ :     (LEU7)  (ASN218)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Serratia marcescens [TaxId: 615]
 d1jjeb_ :     (LEU7)  (SER220)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas aeruginosa, IMP-1 [TaxId: 287]
 d2ynta_ :    (PRO41)  (ASN295)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1dd6b_ :     (LEU7)  (GLU219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas aeruginosa, IMP-1 [TaxId: 287]
 d2yntc_ :    (PRO41)  (MET298)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1dd6a_ :     (LEU7)  (GLU219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas aeruginosa, IMP-1 [TaxId: 287]
 d1wupa_ :     (LEU7)  (SER220)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Serratia marcescens [TaxId: 615]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157