Protein Concepts Dictionary

Tableau information

Concept source:  d3sfca_  amino acid (a.a.) range (GLY78)(LYS248)

nSSEs in this Concept: 18

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHEHEEEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY78)   (GLY82) E1
	   (PHE83)   (ASP87) E2
	   (ASP87)   (GLY92) E3
	   (GLY93)   (THR97) E4
	   (GLN99)  (THR105) E5
	  (THR105)  (LEU110) E6
	  (LEU110)  (ALA115) H7
	  (ASP118)  (GLY124) E8
	  (ILE136)  (SER142) H9
	  (VAL150)  (ASN156) E10
	  (GLY162)  (GLY168) E11
	  (GLY177)  (ASN183) E12
	  (ILE192)  (GLY200) E13
	  (CYS210)  (THR216) E14
	  (TYR220)  (SER224) E15
	  (SER224)  (GLY236) H16
	  (GLY236)  (LEU242) E17
	  (ASP244)  (LYS248) E18

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                            
E2       70.4°   E2                                                                                                                     
E3      132.2°  -61.8°   E3                                                                                                              
E4      -59.8° -125.4°  159.5°   E4                                                                                                       
E5      104.4°  137.3°  108.8°  -78.9°   E5                                                                                                
E6      167.2° -111.4°  -50.8°  122.2°  -65.2°   E6                                                                                         
H7      -89.9°   27.9°   45.3° -149.6° -114.3°  -87.9°   H7                                                                                  
E8      -95.7°  -84.2°  -81.9°   80.1°  137.9°   97.1°  102.1°   E8                                                                           
H9       56.5°  -28.0°  -80.5°  100.4° -155.5° -130.6°  -55.9°  -64.6°   H9                                                                    
E10     128.5°   99.6°   61.6° -127.9°  -49.1°  -39.2°   71.7° -134.6°  127.6°   E10                                                            
E11     -54.7°  -72.8° -109.4°   61.4°  140.2°  138.0° -100.3°   40.9°  -44.8°  170.7°   E11                                                     
E12     -75.5° -136.2°  144.7°  -16.3°   77.2°  108.0° -163.6°  -72.6° -108.7°  123.3°  -65.3°   E12                                              
E13     149.6°  102.0°   48.7° -132.3°  -60.4°  -18.9°   75.3°  113.2°  127.1°  -21.6°  153.1°  121.1°   E13                                       
E14      55.3°   51.9°   91.5° -107.8°  -89.4° -115.1°  -48.4°  131.8°   67.3°   78.3° -100.2° -123.7°   96.3°   E14                                
E15    -104.5° -144.3° -115.0°   46.6°   78.4°   81.5°  158.1°  -60.7° -119.1° -109.6°  -75.9°   30.4°  -98.2°  153.2°   E15                         
H16     142.6°   81.0°   28.5° -153.6°  -80.5°  -32.3°   55.8°  105.1°  105.2°  -33.5°  137.8°  140.3°   21.9°  -88.2°  112.8°   H16                  
E17      37.0°  101.1°  152.5°  -47.9°   67.9°  133.0°  109.5° -119.7°   93.2°  104.1°  -82.9°  -62.7°  123.8°   61.6°  -91.6°  135.2°   E17           
E18     147.8°   83.9°   27.8°  150.3°  -81.1°  -28.2°   59.7°  100.9°  106.8°  -36.1°  135.7°  136.0°   21.0°  -93.6°  107.8°   -5.4°  139.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ikoa_ :    (GLY81)  (LYS253)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d4aa9a_ :    (THR79)  (ASN249)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |automated matches |Camel (Camelus dromedarius) [TaxId: 9838]
 d2i4qa_ :    (GLY81)  (LYS253)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d3liza_ :    (THR77)  (ASP248)   [view usage] : b.50.1.0 |Acid proteases |Acid proteases |automated matches |automated matches |Blattella germanica [TaxId: 6973]
 d2g1na_ :    (THR80)  (LYS253)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d2ikua_ :    (GLY81)  (LYS253)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]
 d3sfca_ :    (GLY78)  (LYS248)   [view usage] : b.50.1.2 |Acid proteases |Acid proteases |Pepsin-like |Chymosin (synonym: renin) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.50