Protein Concepts Dictionary

Tableau information

Concept source:  d3ejza_  amino acid (a.a.) range (GLY108)(GLN460)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY108)  (ASP118) H1
	  (TRP124)  (GLY142) H2
	  (ARG147)  (ARG167) H3
	  (GLY170)  (PHE190) H4
	  (ALA192)  (GLU202) H5
	  (SER214)  (ILE231) H6
	  (TRP253)  (GLY285) H7
	  (ASN287)  (GLY306) H8
	  (GLY306)  (PRO310) H9
	  (GLY316)  (GLY326) H10
	  (SER329)  (GLY351) H11
	  (PHE357)  (LEU378) H12
	  (GLY387)  (GLY393) H13
	  (GLY395)  (SER401) H14
	  (ALA404)  (MET415) H15
	  (ILE422)  (GLY440) H16
	  (LEU444)  (GLN460) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
H2     -159.3°   H2                                                                                                              
H3       32.8° -161.3°   H3                                                                                                       
H4     -161.4°  -14.2°  147.1°   H4                                                                                                
H5      -53.8°  124.9°  -73.4°  138.3°   H5                                                                                         
H6      149.2°  -45.3°  117.9°  -32.9°  146.5°   H6                                                                                  
H7      -91.4°  108.1°  -71.8°  105.5°  -72.3°   81.4°   H7                                                                           
H8     -127.5°  -38.5° -129.3°  -34.0°  143.9°  -55.2°  136.4°   H8                                                                    
H9      -99.5°  -60.0° -122.5°  -65.4°  105.9°  -94.1°  164.9°  -40.0°   H9                                                             
H10    -108.0°   51.2° -133.2°  -58.6°  104.9°  -89.6°  153.9°   39.2°   11.0°   H10                                                     
H11     -49.5°  150.3°  -34.4°  146.0°  -54.8°  115.4°  -42.2° -159.5° -148.6° -155.0°   H11                                              
H12    -118.2°  -41.3°  145.4°  -50.8°  104.6°  -83.3°  141.7°   39.9°   23.4°   12.4° -159.1°   H12                                       
H13     -41.1°  155.0°  -37.2°  156.6°  -42.2°  128.6°  -51.1° -166.2°  136.8°  141.6°  -13.8°  145.5°   H13                                
H14     -48.2°  134.7°  -63.1°  146.9°  -11.8°  144.3°  -64.7°  155.1°  115.7°  115.9°  -43.0°  116.3°   30.4°   H14                         
H15     127.0°  -55.9°  105.5°  -42.2° -176.2°  -30.8°  103.9°  -39.4°  -77.8°  -78.5°  122.4°  -78.4°  135.3°  165.4°   H15                  
H16     -75.5°  110.7°  -84.5°  120.8°  -26.1°  120.4°  -52.5°  145.4°  120.3°  114.9°  -54.5°  109.0°  -47.4°  -27.4°  150.8°   H16           
H17     -68.4°  127.4°  -61.1°  130.0°  -44.9°  110.0°  -28.8°  163.8°  150.4°  146.6°  -26.9°  140.5°  -27.9°   36.1°  131.4°  -31.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3detb_ :   (TRP124)  (ALA458)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2ht2b1 :   (GLY108)  (GLU457)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
 d2hlfb1 :   (GLY108)  (ALA458)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
 d2ez0b1 :   (ILE109)  (GLU457)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
 d1otsa_ :   (GLY108)  (GLU457)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
 d3ejzb_ :   (GLY108)  (GLU457)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli [TaxId: 562]
 d3ejza_ :   (GLY108)  (GLN460)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli [TaxId: 562]
 d2htka1 :   (GLY108)  (GLU457)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
 d2ez0a1 :   (ILE109)  (GLU457)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]
 d4kk8b_ :   (GLY108)  (ALA458)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2hlfa1 :   (GLY108)  (GLU457)   [view usage] : f.20.1.1 |Clc chloride channel |Clc chloride channel |Clc chloride channel |Clc chloride channel |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  f.20