Tableau information
Concept source: d2pw3b_ amino acid (a.a.) range (GLN88)(VAL388)
nSSEs in this Concept: 17
String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN88) (GLU97) H1
(VAL106) (LEU112) H2
(VAL120) (ASP130) H3
(ASP130) (LYS136) H4
(PRO138) (TYR153) H5
(ASN162) (THR178) H6
(THR186) (VAL202) H7
(SER208) (ASN216) H8
(SER217) (TYR223) H9
(LEU229) (GLU243) H10
(ASP247) (LEU252) H11
(THR253) (THR271) H12
(MET277) (GLU288) H13
(ASN302) (LEU319) H14
(PRO325) (GLY351) H15
(VAL365) (ASP374) H16
(ILE376) (VAL388) H17
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -153.1° H2
H3 -55.3° 108.1° H3
H4 81.6° -72.1° 68.9° H4
H5 90.2° -106.3° 144.9° 116.5° H5
H6 -40.5° 127.8° 20.3° 83.1° 125.9° H6
H7 121.5° -75.6° 176.3° -113.2° 31.6° 156.0° H7
H8 -102.9° -69.1° -127.5° -60.3° 60.7° -134.0° 53.8° H8
H9 -42.5° 110.7° -41.5° 41.5° -117.7° -46.3° -138.1° -88.6° H9
H10 -125.0° 37.6° -71.5° -66.1° 143.5° -90.4° 112.0° 98.1° 88.7° H10
H11 -49.1° 108.4° 16.8° 55.0° -137.7° 28.4° -163.0° -111.3° -24.9° -75.9° H11
H12 84.0° -119.2° 130.6° -137.2° -23.6° 110.3° -45.7° -84.3° -122.5° 148.8° 132.3° H12
H13 -50.4° 122.0° 20.8° 88.9° -130.8° 10.8° -156.2° 143.9° 55.3° -84.4° 34.2° -111.8° H13
H14 129.2° -77.4° 141.1° -143.8° -54.7° 132.1° -38.4° 90.9° -171.0° 100.2° 157.8° -48.6° -124.4° H14
H15 -97.8° 78.8° -133.6° -70.2° 48.7° -134.4° 46.9° 12.6° -92.5° 110.2° -116.8° -72.2° -145.2° -85.2° H15
H16 -41.1° 114.3° -25.9° 53.0° 127.6° -31.1° 153.2° 104.6° 16.2° -84.6° -10.5° 125.1° -39.4° -163.0° 108.6° H16
H17 -66.2° 98.6° 11.0° 69.9° 155.1° -29.1° -171.6° 130.2° 49.5° -61.4° 24.7° 137.4° 25.6° -134.9° 138.8° -34.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3o0ja_ : (ASN162) (TYR449) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3g4ia_ : (THR252) (GLN559) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3iaka_ : (VAL91) (ASP374) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3k4sa_ : (VAL91) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3sl3c_ : (GLU87) (ASP374) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d2r8qa_ : (PRO602) (PHE893) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Leishmania major [TaxId: 5664]
d3sl3a_ : (THR86) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d1mkda_ : (THR183) (ASP471) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3k3ha_ : (SER189) (VAL447) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Human (Homo sapiens) [TaxId: 9606]
d3ly2a_ : (ASP164) (ASP448) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
d1oynb_ : (GLN88) (ASP374) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3sl8b_ : (GLU89) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d4tppa_ : (PRO455) (ALA722) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sl4c_ : (GLU87) (ASP374) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d4d09d_ : (ASP597) (PRO879) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zknc_ : (GLU87) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d2pw3a_ : (GLN88) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3sl5a_ : (THR86) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d1oyna_ : (THR86) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d3kkta_ : (ASP164) (VAL462) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
d3sl4a_ : (THR86) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
d2pw3b_ : (GLN88) (VAL388) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.211