Protein Concepts Dictionary

Tableau information

Concept source:  d3e7dc_  amino acid (a.a.) range (ASP7)(ALA204)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEHEHHHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASP7)   (GLU22) H1
	   (PRO29)   (CYS43) H2
	   (MET45)   (ASP51) H3
	   (ASP51)   (SER55) E4
	   (GLY57)   (ALA68) H5
	   (ALA70)   (ALA76) E6
	   (ALA76)   (GLY82) H7
	   (ASN92)   (LEU98) E8
	  (VAL103)  (LYS109) H9
	  (THR113)  (LEU123) H10
	  (LEU123)  (SER129) H11
	  (SER129)  (GLY134) E12
	  (PRO137)  (ALA149) H13
	  (ALA155)  (MET160) E14
	  (GLY166)  (ALA176) H15
	  (VAL181)  (ILE185) E16
	  (GLY192)  (ALA204) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
H2      119.3°   H2                                                                                                              
H3      -52.2°  141.1°   H3                                                                                                       
E4      -83.7°  148.1°  -37.7°   E4                                                                                                
H5     -150.6°   83.4°   98.4°   68.7°   H5                                                                                         
E6       88.4°  -32.4°  114.9°  145.7° -108.5°   E6                                                                                  
H7     -111.0°  113.0° -104.2°  -73.0°  -71.2°  140.2°   H7                                                                           
E8       83.7°  -51.4°   90.3°  117.0°   99.6°  -28.7° -163.7°   E8                                                                    
H9       23.2° -108.2°   47.0°   84.4°  137.5°  -75.8°  132.4°  -63.5°   H9                                                             
H10     -99.4°  140.8°  -60.3°  -23.3°   58.1°  162.1°  -51.1°  135.8°  105.6°   H10                                                     
H11     -63.4°  121.7°  -90.1°  -87.4°  122.6° -118.6°   51.8° -137.2°  -86.6°  -79.2°   H11                                              
E12      89.2°  -33.1°  131.5°  168.5° -116.2°  -24.4°  118.1°  -53.0°  -85.5°  168.1°  -97.6°   E12                                       
H13     -70.7°  150.0°  -22.6°   15.1°   80.5°  134.3°  -85.4°  106.8°   69.4°  -38.0°  -88.3° -153.9°   H13                                
E14      90.5°  -32.3°  133.2°  170.2° -115.2°  -25.6°  116.5°  -54.3°  -87.2°  166.4°   97.2°   -1.8° -155.6°   E14                         
H15     -67.4°  172.9°  -43.9°   29.5°   90.9°  154.6°  -60.9°  134.2°   78.8°  -33.0°  -58.3° -151.7°   31.3° -152.1°   H15                  
E16      97.0°  -39.8°  147.6° -168.3° -112.1°  -45.9°   96.0°  -74.6° -100.8°  146.8°   82.6°  -22.2° -167.1°  -20.6° -140.9°   E16           
H17     -94.1°  142.3°  -72.6°  -42.5°  -72.6° -171.8°  -31.9°  159.4°  109.1°  -24.4°   56.3°  147.6°   53.7°  146.3°  -30.8°  125.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e7da_ :    (ARG14)  (ALA204)   [view usage] : c.23.17.1 |Flavodoxin-like |Precorrin-8X methylmutase CbiC/CobH |Precorrin-8X methylmutase CbiC/CobH |automated matches |Brucella abortus [TaxId: 235]
 d4au1a_ :     (GLY9)  (ALA205)   [view usage] : c.23.17.1 |Flavodoxin-like |Precorrin-8X methylmutase CbiC/CobH |Precorrin-8X methylmutase CbiC/CobH |automated matches |Rhodobacter capsulatus [TaxId: 272942]
 d3e7db_ :     (ASP7)  (ALA204)   [view usage] : c.23.17.1 |Flavodoxin-like |Precorrin-8X methylmutase CbiC/CobH |Precorrin-8X methylmutase CbiC/CobH |automated matches |Brucella abortus [TaxId: 235]
 d3e7dc_ :     (ASP7)  (ALA204)   [view usage] : c.23.17.1 |Flavodoxin-like |Precorrin-8X methylmutase CbiC/CobH |Precorrin-8X methylmutase CbiC/CobH |automated matches |Brucella abortus [TaxId: 235]
 d1f2va_ :     (ASP9)  (ARG207)   [view usage] : c.23.17.1 |Flavodoxin-like |Precorrin-8X methylmutase CbiC/CobH |Precorrin-8X methylmutase CbiC/CobH |Precorrin-8x methylmutase |Pseudomonas denitrificans [TaxId: 43306]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23