Tableau information
Concept source: d1lqma_ amino acid (a.a.) range (LEU11)(GLY214)
nSSEs in this Concept: 17
String of secondary struct.elems. (SSEs) defining this concept: HHEHHEHHEEHHEHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU11) (GLN17) H1
(PHE20) (GLY34) H2
(VAL35) (PRO39) E3
(PRO40) (ASN46) H4
(ASN46) (THR51) H5
(LYS57) (GLN63) E6
(PRO86) (THR99) H7
(GLU112) (GLY118) H8
(GLY118) (ASN123) E9
(LEU126) (ALA130) E10
(HIS134) (GLY140) H11
(TRP141) (ARG156) H12
(VAL159) (GLY165) E13
(GLY165) (ALA173) H14
(HIS180) (PRO186) E15
(PRO190) (GLY196) H16
(HIS202) (GLY214) H17
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -56.9° H2
E3 171.3° -119.2° E3
H4 136.6° 151.1° 42.6° H4
H5 -172.3° -124.9° -16.4° -46.2° H5
E6 15.5° 52.5° 155.8° -131.5° 172.2° E6
H7 163.0° -121.4° -9.6° 36.3° -24.5° 148.2° H7
H8 124.0° -160.8° -62.6° 44.2° -51.4° -134.0° 64.0° H8
E9 14.5° 62.7° 158.3° -124.4° -170.6° -10.5° 149.0° -123.6° E9
E10 -44.6° 17.4° 129.4° 146.0° 139.0° 36.8° -128.6° -167.4° 47.3° E10
H11 99.3° 143.3° -87.9° -65.5° -75.2° -111.3° -89.5° -25.6° -101.6° 141.9° H11
H12 164.7° -138.4° -20.8° -32.3° 14.6° -163.7° -23.5° 41.8° -156.3° -150.2° -67.2° H12
E13 -40.0° 53.9° 131.3° -116.1° 147.7° -24.6° 123.7° -141.5° -29.7° 36.8° -126.9° -143.4° E13
H14 111.1° -146.9° -76.4° -60.3° -63.0° 123.7° -79.1° -16.5° 114.2° 151.3° 12.6° -56.1° -139.2° H14
E15 -53.4° 43.3° 118.1° 117.6° 133.8° -38.6° 112.5° 155.4° -46.4° 29.1° -145.6° 135.5° -18.7° -157.7° E15
H16 145.6° -140.7° -31.9° 12.2° -38.8° 137.0° -24.5° 51.6° 132.0° -140.1° 75.2° -27.0° 117.4° -68.1° 114.4° H16
H17 136.3° -136.7° -52.3° 57.5° -36.5° 151.2° -58.3° 27.0° 143.1° -153.2° 42.6° 35.8° 168.4° 30.0° 170.3° 58.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1lqmc_ : (LEU11) (ASN201) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d1lqmg_ : (LEU11) (GLY214) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d2uugb_ : (LEU11) (GLY214) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d2uuga_ : (LEU11) (GLY214) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d1lqma_ : (LEU11) (GLY214) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d1euib_ : (VAL10) (GLY214) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Escherichia coli [TaxId: 562]
d2j8xc_ : (PRO31) (GLY247) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Epstein-Barr virus [TaxId: 10376]
d2j8xa1 : (PRO31) (GLY247) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Epstein-Barr virus [TaxId: 10376]
d1okba_ : (LEU93) (GLY295) [view usage] : c.18.1.1 |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase-like |Uracil-DNA glycosylase |Uracil-DNA glycosylase |Atlantic cod (Gadus morhua) [TaxId: 8049]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.18