Protein Concepts Dictionary

Tableau information

Concept source:  d3fj1c_  amino acid (a.a.) range (THR6)(ARG212)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHEHHEHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR6)   (ALA27) H1
	   (GLN28)   (ARG40) H2
	   (SER43)   (ALA49) E3
	   (SER53)   (GLY69) H4
	   (PRO71)   (PRO77) E5
	   (SER78)   (ASP84) H6
	   (ALA92)   (SER98) E7
	  (PRO104)  (ASP116) H8
	  (LEU119)  (THR124) E9
	  (ASP126)  (SER129) H10
	  (SER129)  (SER135) H11
	  (ALA136)  (HIS142) E12
	  (ALA151)  (GLU171) H13
	  (ASP173)  (LEU182) H14
	  (LEU182)  (ASP193) H15
	  (TRP194)  (ARG204) H16
	  (SER206)  (ARG212) E17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
H2      -59.0°   H2                                                                                                              
E3      147.0°  139.2°   E3                                                                                                       
H4      -40.4°  -49.1°  168.0°   H4                                                                                                
E5      120.4°  114.3°  -34.8°  157.2°   E5                                                                                         
H6       82.9°   71.5°  -81.1°  110.9°   46.7°   H6                                                                                  
E7      144.2° -155.6°  -19.9°  148.7°  -53.0°  -99.7°   E7                                                                           
H8      -19.9°   39.6°  159.9°  -31.5°  125.9°   80.9° -164.1°   H8                                                                    
E9      142.9° -156.6°  -32.0°  136.2°  -65.8° -112.5°  -12.8° -160.2°   E9                                                             
H10     -61.2°   15.9°  127.8°  -62.3°   99.1°   55.6°  147.2°  -44.4°  155.3°   H10                                                     
H11     -22.8°   36.4°  159.3°  -32.4°  124.8°   79.2° -166.9°   -3.3° -163.4°   41.1°   H11                                              
E12     132.2° -143.7°  -55.4°  112.6°  -89.8° -136.5°  -36.9°  141.3°  -24.1°  155.5° -143.6°   E12                                       
H13     -23.8°  -44.9°  170.8°  -18.3°  139.5°   94.8°  158.8°   13.9°  149.3°  -53.8°  -15.8°  127.8°   H13                                
H14    -137.0°  159.7°   20.6°  149.9°  -49.8°  -96.0°    8.0° -156.7°   18.3°  147.8° -159.2°   41.7° -155.0°   H14                         
H15     171.0°  113.0°  -41.7°  131.9°  -65.6°  -98.8°  -44.4°  151.5°  -44.3°  112.5°  148.8°  -51.0°  147.5°  -51.7°   H15                  
H16     131.0°   86.1°  -53.1°  133.8°  -41.7°  -51.9°  -71.1°  119.6°  -79.9°   76.2°  116.6°  -96.5°  130.0°  -73.6°  -48.1°   H16           
E17     -23.9°  -46.9°  170.3°   17.2° -141.0°  -96.8°  156.7°  -15.8°  147.0°  -56.0°  -17.9°  125.7°   -2.3°  153.1°  147.7°  132.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3fj1d_ :     (THR6)  (ARG212)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
 d3fj1b_ :     (THR6)  (ARG212)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
 d3fj1c_ :     (THR6)  (ARG212)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]
 d3fj1a_ :    (ILE15)  (ARG212)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 246200]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.80