Protein Concepts Dictionary

Tableau information

Concept source:  d1goka_  amino acid (a.a.) range (ALA64)(GLN302)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHHEHEHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA64)   (ASN76) H1
	   (LEU79)   (THR84) E2
	   (PRO92)   (ILE98) H3
	  (LYS101)  (THR113) H4
	  (THR114)  (LYS120) H5
	  (ARG124)  (VAL129) E6
	  (THR142)  (GLY149) H7
	  (ILE153)  (ALA163) H8
	  (ASN166)  (ASN175) E9
	  (LYS183)  (GLY198) H10
	  (GLY203)  (HIS209) E11
	  (GLY215)  (SER227) H12
	  (PRO231)  (ILE235) E13
	  (THR236)  (GLY242) E14
	  (SER244)  (VAL258) H15
	  (GLY263)  (TRP267) E16
	  (PRO292)  (GLN302) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
E2      162.2°   E2                                                                                                              
H3     -111.3°  -53.6°   H3                                                                                                       
H4      -34.0°  162.6° -143.7°   H4                                                                                                
H5      -28.9°  167.8° -130.6°   15.3°   H5                                                                                         
E6      145.6°  -18.7°  -50.4°  160.1°  173.2°   E6                                                                                  
H7     -108.7°   64.1°   31.6° -128.4° -113.1°  -71.1°   H7                                                                           
H8      -54.0°  141.3°  129.1°  -34.5°  -26.6°  159.9°  100.9°   H8                                                                    
E9      113.1°  -59.4°  -82.0°  116.8°  129.9°  -43.9° -111.1°  148.0°   E9                                                             
H10     -84.2°   98.1°   73.2°  -88.7°  -74.6°  111.1°   43.0°  -58.0°  153.9°   H10                                                     
E11     102.5°  -80.6° -118.4°   87.9°  103.2°  -72.6° -143.7°  112.5°  -36.9°  161.9°   E11                                              
H12     -93.9°   83.5°   53.1° -106.5°  -91.5°   93.3°   23.1°  -77.9°  134.1°  -20.2°  163.6°   H12                                       
E13     103.1°  -83.0° -126.0°   83.6°   98.9°  -77.9° -147.0°  104.6°  -46.0°  152.2°   -9.9°  160.5°   E13                                
E14      90.8°  -87.1° -110.4°   86.2°  100.2°  -74.1° -141.3°  117.4°   30.9° -174.7°   19.0°  163.4°  -28.0°   E14                         
H15     -74.2°  100.8°   58.8°  -92.1°  -76.8°  106.7°   36.7°  -70.5°  138.7°  -24.7°  173.3°  -20.4° -175.1°  154.3°   H15                  
E16     135.2°  -55.8° -108.6°  107.4°  120.7°  -59.5°  115.9°  111.5°  -53.8°  126.9°  -38.6°  126.6°  -34.2°  -56.2°  146.9°   E16           
H17     -43.4°  125.7°   73.0°  -71.0°  -57.7°  122.1°   65.4°  -67.0°  127.0°  -53.2°  140.9°  -54.1°  144.9°  123.6°  -33.8° -178.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gooa_ :    (ALA64)  (GLN302)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
 d2g3ia_ :    (SER62)  (GLY302)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Streptomyces olivaceoviridis [TaxId: 1921]
 d1goka_ :    (ALA64)  (GLN302)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
 d2g3ja_ :    (ASN69)  (ASN301)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Streptomyces olivaceoviridis [TaxId: 1921]
 d1b30a_ :    (SER65)  (LEU302)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Fungus (Penicillium simplicissimum) [TaxId: 69488]
 d1i1xa_ :    (ALA64)  (GLN302)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
 d2g4fa_ :    (SER62)  (GLY302)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Streptomyces olivaceoviridis [TaxId: 1921]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1