Protein Concepts Dictionary

Tableau information

Concept source:  d3hpia_  amino acid (a.a.) range (THR128)(LYS370)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHEEEHHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR128)  (GLY143) H1
	  (ALA146)  (ASN150) E2
	  (GLU153)  (ALA163) H3
	  (ALA186)  (LYS202) H4
	  (ASP209)  (GLY220) H5
	  (ALA223)  (ASN227) E6
	  (GLY228)  (LYS239) H7
	  (ASN241)  (THR245) E8
	  (SER255)  (VAL261) E9
	  (SER263)  (ASN267) E10
	  (LYS273)  (TYR283) H11
	  (THR286)  (LYS297) H12
	  (LYS305)  (PRO315) H13
	  (PRO315)  (GLY327) H14
	  (GLY327)  (ILE333) E15
	  (GLN335)  (GLY353) H16
	  (THR356)  (LYS370) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
E2     -109.4°   E2                                                                                                              
H3     -125.4° -123.4°   H3                                                                                                       
H4       -8.4° -113.6°  119.1°   H4                                                                                                
H5       64.4° -145.5°   78.3°   65.6°   H5                                                                                         
E6     -129.2°  -23.9°  105.4° -135.0° -134.3°   E6                                                                                  
H7       25.0°  127.5° -109.0°   27.5°  -39.4°  139.4°   H7                                                                           
E8     -163.0°  -72.4°   51.1°  155.3°  124.0°  -57.9°  160.1°   E8                                                                    
E9       96.0°   37.5°  134.2° -103.7° -108.0°   38.0° -101.5°  -94.7°   E9                                                             
E10     -95.1°   15.7°  134.6°  -98.5° -144.6°   39.6° -115.8°   84.1°   42.5°   E10                                                     
H11      78.3° -156.7°  -59.2°   77.3°   19.2° -136.2°   54.5° -106.9° -121.6°  162.7°   H11                                              
H12     -47.7°  119.9°  -90.9°  -39.4°  -82.4°  141.6°  -58.6°  116.1°  134.7°  105.6°  -82.0°   H12                                       
H13      59.5°  155.4°  -66.5°   52.7°   53.5° -168.8°   51.6° -111.8°  153.1°  141.3°   47.4°  -35.8°   H13                                
H14    -134.7°  -71.1°   61.2° -128.0°  138.9°  -68.3°  149.2°   28.7° -105.1°   76.2° -119.8°   91.3° -100.6°   H14                         
E15    -107.3°  -14.9°  119.8° -109.4° -158.6°  -34.8°  129.7°   69.8°  -51.6°   15.0° -170.9°  107.1°  141.5°  -61.5°   E15                  
H16     -48.6° -135.3°   81.8°  -40.4°   68.3° -156.8°  -51.4°  117.9° -143.5° -120.8°   66.5°  -15.5°   20.6°   97.8°  122.5°   H16           
H17     127.1°   30.6° -106.5°  134.2° -124.0°   10.4°  132.2°  -62.9°   31.8°   45.4° -127.5°  150.4° -172.5°  -77.1°   43.5°  165.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hstc_ :   (ILE140)  (SER378)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1nl5a_ :   (THR128)  (ILE368)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3q28a_ :   (THR129)  (SER371)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
 d1anfa_ :   (THR128)  (ARG367)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3hpia_ :   (THR128)  (LYS370)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli K-12 [TaxId: 83333]
 d3sera_ :   (THR129)  (ASN368)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1laxa_ :   (THR128)  (THR369)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3csba2 :   (THR128)  (GLY353)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli K-12 [TaxId: 83333]
 d3sewa_ :   (THR129)  (ASN368)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3hsta_ :   (THR136)  (SER378)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3seya_ :   (THR129)  (ALA371)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3lbsb_ :   (THR128)  (ALA365)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
 d3sesa_ :   (THR129)  (ALA371)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1a7la_ :   (THR128)  (GLY138)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1jvxa_ :   (THR128)  (LYS371)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1mh3a2 :   (THR128)  (THR366)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3seva_ :   (THR129)  (ALA370)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d1hsja2 :   (THR128)  (ALA370)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
 d3q29c_ :   (THR129)  (ASN368)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
 d3q29a_ :   (THR129)  (SER370)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
 d3lc8a_ :   (THR128)  (ASP366)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94