Protein Concepts Dictionary

Tableau information

Concept source:  d3o15a_  amino acid (a.a.) range (ARG19)(SER209)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEHEHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG19)   (SER27) H1
	   (SER27)   (GLY33) E2
	   (GLY33)   (LYS38) H3
	   (ASP40)   (GLY52) H4
	   (LEU55)   (LYS61) E5
	   (GLU69)   (GLY86) H6
	   (PRO88)   (ASN92) E7
	   (ASP94)  (ASN100) H8
	  (ASP104)  (GLY109) E9
	  (ALA115)  (ALA121) H10
	  (ILE126)  (SER130) E11
	  (THR133)  (GLY144) H12
	  (ASP146)  (GLY151) E13
	  (VAL168)  (GLY178) H14
	  (PRO182)  (GLY188) E15
	  (THR190)  (GLY201) H16
	  (ASP203)  (SER209) E17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
E2       60.8°   E2                                                                                                              
H3       27.6°  -88.2°   H3                                                                                                       
H4      118.5° -177.3°   90.9°   H4                                                                                                
E5      -63.7°  -24.6°   89.5°  158.0°   E5                                                                                         
H6      108.9°  158.0°   82.3°  -19.4°  170.6°   H6                                                                                  
E7      -76.2°  -47.6°   96.5°  135.0°  -23.5°  153.1°   E7                                                                           
H8      103.3°  108.2°  -93.4°  -69.3°  132.7°  -52.9°  153.3°   H8                                                                    
E9      -75.9°  -75.6°   83.9°  106.9°  -51.3°  122.7°  -31.3°  175.3°   E9                                                             
H10     103.0°   93.8° -100.5°  -83.8°  117.7°  -68.6°  137.2°  -16.2°  168.5°   H10                                                     
E11     -62.0°  -75.9°   68.2°  106.2°  -53.9°  118.1°  -39.8°  161.2°  -15.7°  164.5°   E11                                              
H12     126.0°   92.7° -128.0°  -85.8°  111.0°  -77.8°  121.4°  -37.7°  146.2°  -27.6°  160.6°   H12                                       
E13     -34.2°  -70.1°   42.0°  110.8°  -57.3°  113.3°  -56.1°  134.5°  -43.6°  137.1°  -28.5°  158.5°   E13                                
H14    -162.6°  135.7° -135.2°  -44.7°  133.3°  -53.7°  118.3°  -68.5°  111.0°  -73.5°  121.9°  -56.8°  144.7°   H14                         
E15      19.0°  -50.6°   42.6°  129.5°  -46.9°  124.8°  -57.2°  120.6°  -59.4°  117.1°  -47.4°  134.3°  -24.2° -168.8°   E15                  
H16    -160.4°  129.3° -139.0°  -52.3°  117.5°  -67.2°   98.8°  -89.6°   90.0°  -93.5°  102.0°  -72.9°  127.9°  -21.2°  149.3°   H16           
E17      34.4°  -26.9°   61.6°  151.9°  -38.9°  137.3°  -60.1°  104.3°  -77.8°   94.8°  -70.8°  105.8°  -53.2°  160.2°  -29.5°  155.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1g4ta_ :    (ARG19)  (SER209)   [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]
 d1g4tb_ :  (SER1018) (SER1209)   [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]
 d1g69b_ :  (SER1018) (SER1209)   [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]
 d1g67a_ :    (ARG19)  (SER209)   [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]
 d3o15a_ :    (ARG19)  (SER209)   [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]
 d1g6cb_ :  (SER1018) (SER1209)   [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]
 d1g4sa_ :    (ARG19)  (SER209)   [view usage] : c.1.3.1 |TIM beta/alpha-barrel |Thiamin phosphate synthase |Thiamin phosphate synthase |Thiamin phosphate synthase |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1