Protein Concepts Dictionary

Tableau information

Concept source:  d1x0ra1  amino acid (a.a.) range (LEU26)(ALA234)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEHEEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU26)   (GLY34) H1
	   (PHE37)   (PRO43) E2
	   (PRO48)   (ARG60) H3
	   (TYR61)   (GLY68) H4
	   (ASP70)   (VAL76) E5
	   (SER78)   (GLY94) H6
	   (PHE99)  (PRO105) E7
	  (GLY107)  (LEU113) H8
	  (ARG126)  (ASP132) E9
	  (ARG138)  (PRO144) E10
	  (ASP152)  (SER166) H11
	  (LYS168)  (ALA173) E12
	  (ASP174)  (GLY182) H13
	  (GLU183)  (PRO188) E14
	  (THR192)  (GLY203) H15
	  (PHE212)  (THR216) E16
	  (SER219)  (ALA234) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
E2      147.8°   E2                                                                                                              
H3       16.9° -161.6°   H3                                                                                                       
H4      -60.8° -151.1°  -47.0°   H4                                                                                                
E5      172.4°  -25.1° -167.2°  126.6°   E5                                                                                         
H6      -55.8°   92.2°  -72.1° -115.3°  117.4°   H6                                                                                  
E7      164.3°  -47.9°  148.4°  103.5°  -23.1°  139.5°   E7                                                                           
H8      -71.6° -114.5°   75.0°   61.5° -112.7°  -86.9° -102.4°   H8                                                                    
E9      -41.7°  170.0°  -26.4°   21.1°  145.1°  -97.5°  122.8°   68.8°   E9                                                             
E10     132.7°  -15.1°  147.0° -166.0°  -40.1°   77.3°  -63.0° -115.8°  172.6°   E10                                                     
H11     -55.5°  154.9°  -43.5°    8.7°  132.1° -108.3°  109.0°   54.3°  -20.1°  167.2°   H11                                              
E12     115.9°  -35.6°  132.8°  154.9°  -58.6°   61.5°  -78.5°  -93.5°  154.0°   25.6°  147.7°   E12                                       
H13     -71.4°  108.6°   78.0°   71.4°  111.7°   77.6°  105.6°  -11.0°  -76.2°  107.4°  -63.8°   83.9°   H13                                
E14    -108.0°  103.3°  -94.7°  -47.8°   79.6°  154.7°   56.6°   68.5°  -68.5°  118.3°  -52.5°  123.9°   78.5°   E14                         
H15      35.0° -112.9°   51.2°   95.1° -138.0°  -20.9° -160.4°  -81.2°   76.6°  -97.9°   88.8°  -82.1°  -74.5°  140.0°   H15                  
E16      54.7° -106.5°   57.0°   96.8° -119.6°  -56.1°  132.2°  125.3°   77.1°  -95.5°   97.2° -100.1° -121.9°  134.3°   49.4°   E16           
H17     137.7°  -10.1°  151.7° -161.2°  -35.1°   82.4°  -57.9° -116.3°  174.9°   -5.1° -164.0°  -29.0° -108.7°  113.4° -103.0°  -98.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3a2vf_ :    (ASP28)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
 d1x0rb_ :    (LEU26)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin |Aeropyrum pernix [TaxId: 56636]
 d3a5wh_ :    (LEU26)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
 d3a2va_ :    (LEU26)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
 d3a2vd_ :    (LEU26)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
 d3a2vb_ :    (LEU26)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
 d3a2xb_ :    (LEU26)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
 d3a2wc_ :    (ASP28)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Aeropyrum pernix [TaxId: 272557]
 d1x0ra1 :    (LEU26)  (ALA234)   [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin |Aeropyrum pernix [TaxId: 56636]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.47