Protein Concepts Dictionary

Tableau information

Concept source:  d4hoza1  amino acid (a.a.) range (LYS272)(ASP514)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHEHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS272)  (ARG282) H1
	  (ALA291)  (PHE297) E2
	  (ASP309)  (ASN313) H3
	  (ASN316)  (PHE321) E4
	  (PHE321)  (LEU326) H5
	  (THR340)  (GLY356) H6
	  (GLY359)  (LEU365) E7
	  (ALA373)  (GLY378) H8
	  (GLU386)  (THR396) H9
	  (THR402)  (TYR406) E10
	  (LYS420)  (ASP425) H11
	  (VAL427)  (THR439) H12
	  (LYS443)  (THR454) H13
	  (ARG456)  (THR461) H14
	  (ASN483)  (GLU488) H15
	  (SER491)  (ASN497) H16
	  (SER500)  (ASP514) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
E2      162.0°   E2                                                                                                              
H3      -56.3°  117.5°   H3                                                                                                       
E4      140.0°  -27.0°  127.7°   E4                                                                                                
H5      122.9°  -47.5°  136.5°  -21.2°   H5                                                                                         
H6      -59.3°  130.1°  -42.8°  156.2°  177.4°   H6                                                                                  
E7       98.6°  -67.3°  113.2°  -41.4°  -28.0° -152.9°   E7                                                                           
H8     -134.8°   59.3°  153.1°   63.3°   63.9° -115.8°  -90.7°   H8                                                                    
H9      -77.9°  115.7°  -62.9°  142.0°  156.2°  -22.8° -175.8°   93.5°   H9                                                             
E10      97.2°  -65.2°   90.9°  -47.3°  -45.9°  133.7°  -25.8° -108.8°  151.6°   E10                                                     
H11      35.2° -154.0°  -44.8° -171.4°  157.8°  -24.5°  133.1° -125.3°  -43.1°  124.4°   H11                                              
H12     170.0°    8.0°  120.6°  -32.3°  -51.4°  126.3°  -73.5°   52.8°  109.8°  -73.0° -150.8°   H12                                       
H13     -33.7°  163.2°  -76.2°  150.4°  129.7°  -52.8°  117.9° -104.0°  -60.2° -127.0°   33.5°  155.9°   H13                                
H14      28.1° -137.3°  -72.8°  112.2°   95.0°  -87.0°   70.8°  129.4° -105.8°   73.8°   63.3° -144.1°  -53.3°   H14                         
H15     -49.2°  134.4° -105.3°  111.6°   90.7°  -91.9°   82.6°   89.1°  -96.6° -101.0°  -70.6°  133.5°  -39.1°  -43.3°   H15                  
H16     -62.8°  131.7° -107.1°  124.3°  108.2°  -73.9°  111.7°   72.6°  -68.9°  133.8°  -62.4°  125.4°  -32.1°  -71.8°   33.7°   H16           
H17     -76.9°  119.8°  -77.7°  141.3°  145.4°  -35.0°  163.6°   81.9°  -18.0° -168.6°  -46.4°  112.4°  -50.9° -102.8°  -82.7°  -52.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4howa1 :   (LYS272)  (ASP514)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isomaltulose synthase PalI |Erwinia rhapontici [TaxId: 55212]
 d4hpha1 :   (LYS272)  (ASP514)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isomaltulose synthase PalI |Erwinia rhapontici [TaxId: 55212]
 d1uoka2 :   (ASN232)  (LYS472)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Oligo-1,6, glucosidase |Bacillus cereus [TaxId: 1396]
 d4hoxa1 :   (LYS272)  (ASP514)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Isomaltulose synthase PalI |Erwinia rhapontici [TaxId: 55212]
 d4aiea1 :   (GLY215)  (HIS458)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Lactobacillus acidophilus [TaxId: 272621]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1