Protein Concepts Dictionary

Tableau information

Concept source:  d2aqia_  amino acid (a.a.) range (SER20)(ASP261)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHEHEHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER20)   (GLY33) H1
	   (LEU36)   (ASP42) E2
	   (LEU44)   (ASP52) H3
	   (ALA56)   (GLU62) E4
	   (ASN67)   (LEU74) H5
	   (LEU74)   (ALA81) H6
	   (GLY85)   (PRO99) E7
	  (ALA114)  (ALA124) H8
	  (ALA128)  (LEU134) H9
	  (GLY141)  (MET147) E10
	  (TRP160)  (GLY183) H11
	  (GLY183)  (GLY192) E12
	  (THR196)  (GLY205) H13
	  (GLU209)  (ALA226) H14
	  (THR236)  (SER247) H15
	  (SER247)  (THR253) H16
	  (GLY255)  (ASP261) E17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
E2     -165.6°   E2                                                                                                              
H3      -41.0°  144.6°   H3                                                                                                       
E4      137.9°  -39.9°  170.8°   E4                                                                                                
H5        8.4°  169.8°  -43.6°  133.5°   H5                                                                                         
H6      -36.2°  137.1°  -31.1°  156.4°  -43.9°   H6                                                                                  
E7      159.6°  -29.9°  118.6°  -62.3° -160.3°  128.0°   E7                                                                           
H8        5.9°  169.3°  -35.4°  142.9°   10.0°  -34.3° -153.9°   H8                                                                    
H9      -34.8°  132.8°  -73.8°  107.9°  -37.1°  -55.1°  161.2°  -40.7°   H9                                                             
E10     151.8°  -32.3°  112.8°  -69.8°  156.4°  117.1°  -12.2°  147.3°  153.5°   E10                                                     
H11     -31.9°  143.2°  -71.4°  106.2°  -27.8°  -65.7°  166.2°  -36.7°  -24.7°  175.5°   H11                                              
E12     126.4°  -58.4°   86.6°  -95.7°  130.2°   95.0°  -33.8°  121.4°  147.0°  -26.2° -158.0°   E12                                       
H13    -149.2°   42.1°  108.7°  -70.7° -148.1°  124.0°   12.6° -143.3°  173.1°   19.6° -162.0°  -29.7°   H13                                
H14     -35.5°  158.7°  -31.2°  140.5°  -31.0°  -53.8°  130.1°  -30.7°  -68.1°  131.1°  -53.3° -107.5° -117.6°   H14                         
H15     -55.7°  123.7°  -91.6°   84.0°  -49.8°  -90.6°  141.1°  -59.6°  -44.2°  152.2°  -25.1°  165.9°  140.7°   65.8°   H15                  
H16    -115.7°   74.0°  121.3°  -49.6° -107.3° -148.0°   73.3° -115.7° -113.7°   85.6°  -93.4°   99.2°   70.9°   94.5°  -69.9°   H16           
E17      99.1°  -82.5°   62.3° -122.1°  104.3°   66.3°  -62.2°   94.7°  119.6°  -52.7°  130.9°  -28.7°  -58.1°  -89.7°  153.8°  123.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e9qa_ :    (ILE24)  (GLN243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Shigella flexneri [TaxId: 198214]
 d4dqua_ :    (ILE21)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
 d2aqia_ :    (SER20)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
 d2aqha_ :    (VAL21)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
 d2aq8a_ :    (ILE21)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
 d2aqka_ :    (ILE21)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
 d3oeya_ :    (ILE21)  (ASP261)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2