Protein Concepts Dictionary

Tableau information

Concept source:  d3o05a_  amino acid (a.a.) range (PRO63)(VAL267)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHHHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO63)   (VAL73) H1
	   (PRO76)   (LYS80) E2
	   (PHE86)   (GLU96) H3
	   (ASP98)  (SER103) E4
	  (GLU116)  (LYS121) H5
	  (VAL122)  (ALA128) E6
	  (ASP130)  (GLY141) H7
	  (ALA143)  (THR147) E8
	  (SER157)  (LEU176) H9
	  (GLU179)  (ARG190) H10
	  (VAL193)  (GLY203) H11
	  (VAL207)  (ALA211) E12
	  (THR217)  (GLY228) H13
	  (ASP230)  (SER236) E14
	  (SER236)  (SER241) H15
	  (PRO244)  (THR256) H16
	  (PRO261)  (VAL267) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                                     
E2      161.4°   E2                                                                                                              
H3      -34.8°  161.0°   H3                                                                                                       
E4      132.8°  -28.7°  159.1°   E4                                                                                                
H5      -52.7°  144.7°  -18.4°  163.9°   H5                                                                                         
E6      106.3°  -55.1°  136.9°  -26.5° -153.6°   E6                                                                                  
H7      -86.2°  112.2°  -57.2°  140.8°  -40.6°  165.7°   H7                                                                           
E8      100.5°  -63.2°  120.3°  -38.9°  131.7°  -26.7°  159.3°   E8                                                                    
H9      -87.0°   91.6° -102.6°   90.9° -104.9°   87.7°  -86.1°  113.6°   H9                                                             
H10     120.1°   69.7°   91.5°   86.2°   79.3°  103.9°  -74.6°   85.2° -144.7°   H10                                                     
H11      33.8° -128.5°   62.8° -100.2°   80.9°  -74.5°  119.0°  -67.0°  -96.8°  118.3°   H11                                              
E12      94.6°  -75.7°   98.9°  -61.8°  104.7°  -57.0°  130.2°  -30.4° -143.6°   62.2°  -67.7°   E12                                       
H13     -86.5°   94.3°  -98.6°   96.2°  -99.4°   94.3°  -79.4°  120.3°    6.8° -140.7°  -99.9°  150.4°   H13                                
E14     119.0°  -64.1°   99.4°  -72.3°   91.8°  -85.6°   94.5°  -65.1°  154.1°   20.3° -105.4°  -42.8°  153.6°   E14                         
H15      68.7° -104.7°   69.4°  -90.7°   77.4°   79.8° -111.9°   54.4° -147.8°   67.5°  -51.3°   29.7° -151.2°   54.6°   H15                  
H16     -71.6°  103.7°  -93.1°   95.7° -100.2°   84.9°  -92.8°  107.9°  -17.2° -161.4°   79.7°  134.5°  -20.7°  167.6°  130.9°   H16           
H17     115.0°  -70.5°   92.2°  -80.7°   83.5°  -94.2°   86.4°  -72.9°  156.3°   13.9° -106.5°  -48.4°  153.5°   -8.7°  -55.2° -173.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3fema_ :    (PRO63)  (SER269)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3o06a_ :    (PRO63)  (VAL267)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2nv2k_ :    (PRO64)  (LEU267)   [view usage] : c.1.2.6 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |PdxS-like |automated matches |Bacillus subtilis [TaxId: 1423]
 d3o07a_ :    (PRO63)  (VAL267)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3o05a_ :    (PRO63)  (VAL267)   [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1