Protein Concepts Dictionary

Tableau information

Concept source:  d2rh4b_  amino acid (a.a.) range (GLU7)(CYS255)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHEHEHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU7)   (GLY13) E1
	   (ILE18)   (GLY30) H2
	   (ARG32)   (ARG38) E3
	   (GLY39)   (GLY54) H4
	   (ALA57)   (THR61) E5
	   (VAL67)   (GLU79) H6
	   (ASP85)   (ASN89) E7
	  (GLU105)  (LYS127) H8
	  (GLY130)  (GLY135) H9
	  (GLY137)  (ALA143) E10
	  (ALA154)  (LEU175) H11
	  (GLY179)  (PHE189) E12
	  (MET194)  (ILE205) H13
	  (SER209)  (VAL221) H14
	  (PRO229)  (ILE240) H15
	  (PRO242)  (VAL247) H16
	  (ALA249)  (CYS255) E17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
H2     -168.7°   H2                                                                                                              
E3      -15.0° -166.1°   E3                                                                                                       
H4      143.9°  -30.5°  158.6°   H4                                                                                                
E5      -35.8°  150.3°  -21.4°  178.1°   E5                                                                                         
H6      150.8°  -18.3°  157.6°  -22.6°  159.0°   H6                                                                                  
E7      -10.6°  167.4°  -23.5°  137.2°  -42.1°  150.4°   E7                                                                           
H8      168.5°  -16.5°  154.0°  -46.1°  134.5°  -34.0° -175.6°   H8                                                                    
H9     -141.1°   47.0° -144.0°   45.2° -133.3°   57.9° -131.1°  -47.7°   H9                                                             
E10     -19.1°  156.4°  -33.6°  126.4°  -53.0°  140.0°  -11.0°  172.3° -127.3°   E10                                                     
H11     161.2°  -29.8°  148.9°  -52.2°  127.6°  -48.0°  158.0°  -18.4°  -34.7° -160.2°   H11                                              
E12     -36.1°  135.5°  -50.7°  108.0°  -71.9°  117.9°  -32.5°  151.8°  126.7°  -22.6° -158.4°   E12                                       
H13      27.7° -159.8°   33.8°  134.7°   44.0° -155.9°   19.4° -157.3° -113.6°  -24.2° -138.9°  -46.0°   H13                                
H14     132.5°  -56.4°  134.3°  -54.3°  124.1°  -67.7°  123.0°  -55.3°   -9.8°  120.7°  -40.1°  124.1°  104.8°   H14                         
H15     144.9°  -45.8°  132.6°  -68.2°  111.5°  -64.1°  143.9°  -31.8°   40.7°  150.5°   16.5°  165.7°  126.5°   42.1°   H15                  
H16      58.9° -132.3°   54.9°  131.5°  -46.6° -147.4°   54.6° -121.2°  -89.7°   61.4° -103.6°   83.1°   37.3°   79.9°  -89.5°   H16           
E17     -59.5°  111.0°  -73.0°   85.9°  -94.3°   93.0°  -57.4°  127.0°  117.4°  -47.6°  138.1°  -25.0°  -70.3° -119.6°  153.9°  106.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2rhra_ :     (GLU7)  (CYS255)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |beta-keto acyl carrier protein reductase |Streptomyces coelicolor [TaxId: 1902]
 d3oidc_ :     (LYS5)  (ASP243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3iaha_ :    (ARG13)  (GLN244)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
 d3o4rb_ :    (LYS33)  (GLY271)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2rh4b_ :     (GLU7)  (CYS255)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |beta-keto acyl carrier protein reductase |Streptomyces coelicolor [TaxId: 1902]
 d3qrwa_ :     (GLU7)  (CYS255)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d3o4ra_ :    (LYS33)  (GLY271)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3iahb_ :    (ILE15)  (GLN244)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Salmonella enterica [TaxId: 99287]
 d4imrb_ :    (ARG12)  (THR250)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
 d3ezla_ :     (ARG6)  (ASN242)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d3e9qb_ :    (ILE15)  (GLN243)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Shigella flexneri [TaxId: 198214]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2