Protein Concepts Dictionary

Tableau information

Concept source:  d2a9vb_  amino acid (a.a.) range (LEU2)(ASN197)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU2)    (ASP8) E1
	   (HIS15)   (GLY25) H2
	   (ASP27)   (PRO32) E3
	   (ASP36)   (ASP41) H4
	   (GLY45)   (GLY51) E5
	   (LYS61)   (HIS72) H6
	   (TYR74)   (CYS80) E7
	   (CYS80)   (GLY91) H8
	   (GLY91)   (LYS96) E9
	   (LYS98)  (GLY103) E10
	  (THR105)  (MSE110) E11
	  (SER121)  (VAL125) E12
	  (ASN130)  (ASN135) E13
	  (ASP139)  (ALA144) E14
	  (GLN152)  (HIS156) E15
	  (PRO160)  (GLN165) E16
	  (ARG177)  (ASN197) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
H2     -169.5°   H2                                                                                                              
E3      -21.7°  167.6°   E3                                                                                                       
H4     -156.5°   16.9° -171.9°   H4                                                                                                
E5      -23.3°  147.2°  -44.8°  133.5°   E5                                                                                         
H6     -165.4°   24.8°  145.5°  -33.6° -163.7°   H6                                                                                  
E7      -35.2°  136.3°  -56.0°  121.3°  -13.1° -150.8°   E7                                                                           
H8       89.9° -100.5°   70.2° -106.6°  109.5°  -75.9° -114.7°   H8                                                                    
E9      -47.5°  122.3°  -69.1°  111.0°  -25.5°  144.5°   20.8° -134.6°   E9                                                             
E10    -119.8°   50.3° -135.6°   50.5° -102.7°   74.8°  -97.9°  147.3°  -78.0°   E10                                                     
E11     134.4°  -55.5°  116.8°  -59.5°  145.6°  -31.1°  140.6°   47.1°  154.7° -105.8°   E11                                              
E12     -50.6°  123.7°  -56.9°  130.2°  -54.2°  138.7°  -64.2° -114.5°  -54.9°  -80.0°  150.1°   E12                                       
E13     118.7°  -71.3°  101.1°  -74.9°  132.9°  -46.7° -131.6°   31.9°  150.9°  121.5°   15.8°  143.1°   E13                                
E14     -79.2°   91.3° -100.8°   78.2°  -56.0°  111.6°  -45.6° -149.7°  -33.1°   57.8°  128.2°  -80.1° -136.2°   E14                         
E15     127.4°  -62.0°  105.9°  -75.6°  150.6°  -43.0°  160.8°   47.4° -168.2° -100.4°  -37.1°  113.4°   38.9°  153.3°   E15                  
E16     -38.4°  132.4°  -59.8°  118.4°  -15.1°  149.9°   -6.0° -120.6°   14.7°  -92.0°  145.1°  -61.4° -137.2°  -41.2°  165.6°   E16           
H17     125.1°  -63.8°  103.9°  -78.2°  148.3°   46.3°  159.9°   49.3° -163.3°  -99.1°   42.0° -108.5°   43.5°  154.4°    5.0° -163.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2a9vd_ :     (LEU2)  (ASN197)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GMP synthase subunit A, GuaAA |Thermoplasma acidophilum [TaxId: 2303]
 d2a9vc_ :     (LEU2)  (LYS195)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GMP synthase subunit A, GuaAA |Thermoplasma acidophilum [TaxId: 2303]
 d2a9va1 :     (LEU2)  (GLU196)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GMP synthase subunit A, GuaAA |Thermoplasma acidophilum [TaxId: 2303]
 d2a9vb_ :     (LEU2)  (ASN197)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GMP synthase subunit A, GuaAA |Thermoplasma acidophilum [TaxId: 2303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23