Protein Concepts Dictionary

Tableau information

Concept source:  d1m52a_  amino acid (a.a.) range (GLY254)(VAL448)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHHHEEEEEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY254)  (GLY259) E1
	  (VAL268)  (LYS274) E2
	  (GLU279)  (ILE293) H3
	  (LEU302)  (GLU308) E4
	  (PHE311)  (GLU316) E5
	  (LEU323)  (GLU329) H6
	  (ASN331)  (SER336) H7
	  (SER336)  (ASN358) H8
	  (ASN358)  (ASP363) E9
	  (CYS369)  (GLU373) E10
	  (LEU376)  (PHE382) E11
	  (GLY383)  (THR389) E12
	  (ASP391)  (ALA395) E13
	  (ALA407)  (ALA412) H14
	  (ASN414)  (ILE418) E15
	  (ILE418)  (TYR435) H16
	  (ASP444)  (VAL448) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      137.6°   E2                                                                                                              
H3      -55.3° -155.3°   H3                                                                                                       
E4      115.6°  -22.3° -149.7°   E4                                                                                                
E5      -59.9°  161.5°   31.0°  174.8°   E5                                                                                         
H6      -72.7°  127.8°  -72.7°  135.6°  -42.1°   H6                                                                                  
H7       92.8° -102.0°   53.4° -103.0°   80.3° -120.5°   H7                                                                           
H8      111.8°  -52.9°  104.8°  -48.4°  134.5° -172.7°   54.6°   H8                                                                    
E9      -94.9°   79.2° -124.4°   83.0°  -94.6°  -52.7° -167.1°  130.7°   E9                                                             
E10     -15.7°  148.7°  -50.5°  128.4°  -46.6°   57.5°   97.2°  126.4°   87.6°   E10                                                     
E11     129.0°  -16.3°  142.1°  -17.8°  167.4° -144.0°  -89.7°  -37.5°   93.5°  143.6°   E11                                              
E12     117.5°  -77.6°   77.8°  -84.1°  100.2°  133.0°  -26.2°  -40.1°  147.5° -123.4°  -68.0°   E12                                       
E13     102.0°   52.2° -152.3°   50.0° -126.9°  -85.9°  152.8°   98.4°  -33.7°  103.2°   63.2°  129.9°   E13                                
H14     127.9°    9.9°  159.4°   14.2° -167.9° -127.6°  107.0°   54.6°  -76.1° -138.8°   17.4°   84.3°  -46.1°   H14                         
E15     -43.5° -156.6°  -12.7° -142.2°   36.7°   75.4°   57.8° -103.7°  123.3°  -41.1° -140.6°  -83.7°  144.2°  155.3°   E15                  
H16     -61.2°  124.2°  -80.0°  123.3°  -52.8°  -19.6° -132.8°  167.6°   45.0°  -48.2°  137.5° -151.3°   74.4° -120.1°  -78.4°   H16           
H17      97.8°  -99.0°   56.2° -102.0°   81.6°  120.6°   -5.3°  -54.1°  162.6°  101.7°  -87.7°  -22.0° -150.9° -104.8°   61.7°  134.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2hzia_ :   (GLY254)  (ASP455)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Human (Homo sapiens) [TaxId: 9606]
 d1m52a_ :   (GLY254)  (VAL448)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
 d2hk5a_ :   (PHE256)  (GLY456)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Haemopoetic cell kinase Hck |Human (Homo sapiens) [TaxId: 9606]
 d1m52b_ :   (GLY254)  (VAL448)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
 d2g2ha_ :   (GLY273)  (ASP474)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1oplb2 :   (GLY273)  (ASP474)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
 d3ue4a_ :   (GLY254)  (ASP455)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1opla3 :   (GLY273)  (VAL467)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
 d1opka3 :   (GLY273)  (VAL467)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Mouse (Mus musculus) [TaxId: 10090]
 d2f4ja_ :   (GLY254)  (VAL448)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2fo0a3 :   (GLY273)  (LYS473)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Abelsone tyrosine kinase (abl) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144